PROTEIN: HRGMv2_4730_5_4
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4730_5_4.pdb
Genome ID:
Protein ID:
HRGMv2_4730_5_4
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MYDIAIIGLG PAGATIARLL SKKYKVLALD RKIENRGKCC GGLLSPDAQK ILASFNLCLP 60 KEVLVNPQIF SVRTIDLDNN LERYYQRFYL NMDRAKFDKW LISLIPTSVD IINKATCRKI 120 TKTEQGYKIE YEKENKIYTQ EAKVVIGADG ANSVVRNTFD KKHKIKRYVS IQEWYENEEK 180 SPVYTSIFDS KLTDSYSWTI SKDDYFIVGG AFPEDNCDQR FEKLKEELLK KGYKFSKEKL 240 YRREGCFVYL TNTWHSTFTG KDNAYLIGES AGMISSSSLE GISYAMESAY ILAEILNEKL 300 LDSNKKYHRK TFKIRLKLKI KILKRPFMYN KILRKLVMKS GLQAIEKIDK 350
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P31456-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9419 |
0.9576 |
| AF-Q329C3-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9402 |
0.956 |
| AF-Q58915-F1-model_v4 | 1 | 345 | 4 | 352 | 0.8058 |
0.8729 |
| AF-Q57952-F1-model_v4 | 1 | 346 | 7 | 365 | 0.8052 |
0.8756 |
| AF-A0A077Z522-F1-model_v4 | 1 | 328 | 3 | 285 | 0.8003 |
0.9011 |
| AF-K7KB36-F1-model_v4 | 1 | 345 | 39 | 402 | 0.7644 |
0.8811 |
| AF-A0A1D6MQC2-F1-model_v4 | 1 | 345 | 29 | 394 | 0.7628 |
0.8771 |
| AF-O06538-F1-model_v4 | 1 | 345 | 5 | 330 | 0.76 |
0.8233 |
| AF-A0A0D2GSW5-F1-model_v4 | 1 | 345 | 2 | 378 | 0.7508 |
0.828 |
| AF-K0EVA3-F1-model_v4 | 1 | 345 | 3 | 368 | 0.7505 |
0.8141 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5K1JRB7-F1-model_v4 | GT8 | 1 | 345 | 430 | 820 | 0.5631 |
0.8077 |
| A0A8S2A986 | GT2 | 1 | 344 | 566 | 942 | 0.5362 |
0.8036 |
| UKZ76834.1 | GH93 | 1 | 345 | 4 | 384 | 0.533 |
0.7847 |
| UST52912.1 | GT1 | 1 | 345 | 442 | 782 | 0.5322 |
0.773 |
| WIA13184.1 | GH13_18 | 1 | 346 | 1 | 439 | 0.5286 |
0.7978 |
| AF-B8GDB7-F1-model_v4 | GT2 | 1 | 317 | 2 | 580 | 0.5183 |
0.7678 |
| AF-A0A5B8N322-F1-model_v4 | GT4 | 1 | 303 | 395 | 741 | 0.5129 |
0.8015 |
| AF-A0A7I7NKQ7-F1-model_v4 | GH15 | 14 | 343 | 1 | 355 | 0.4972 |
0.8004 |
| A0A481YWN0 | GT2 | 1 | 298 | 286 | 680 | 0.4944 |
0.7603 |
| AF-A0A517L0X3-F1-model_v4 | CE5 | 7 | 345 | 4 | 670 | 0.4919 |
0.7334 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5K1JRB7 | GT8 | 1 | 345 | 430 | 820 | 0.5631 |
0.8077 |
| A0A8S2A986 | GT2 | 1 | 344 | 566 | 942 | 0.5362 |
0.8036 |
| UKZ76834.1 | GH93 | 1 | 345 | 4 | 384 | 0.533 |
0.7847 |
| UST52912.1 | GT1 | 1 | 345 | 442 | 782 | 0.5322 |
0.773 |
| WIA13184.1 | GH13_18 | 1 | 346 | 1 | 439 | 0.5286 |
0.7978 |
| B8GDB7 | GT2 | 1 | 317 | 2 | 580 | 0.5183 |
0.7678 |
| A0A5B8N322 | GT4 | 1 | 303 | 395 | 741 | 0.5129 |
0.8015 |
| A0A7I7NKQ7 | GH15 | 14 | 343 | 1 | 355 | 0.4972 |
0.8004 |
| A0A481YWN0 | GT2 | 1 | 298 | 286 | 680 | 0.4944 |
0.7603 |
| A0A517L0X3 | CE5 | 7 | 345 | 4 | 670 | 0.4919 |
0.7334 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3oz2-assembly1.cif.gz_A | 1 | 346 | 4 | 370 | 0.7989 |
0.8753 |
| 3atr-assembly1.cif.gz_A | 1 | 345 | 5 | 374 | 0.7558 |
0.8769 |
| 4opi-assembly1.cif.gz_A | 1 | 345 | 5 | 374 | 0.7538 |
0.8749 |
| 4opu-assembly1.cif.gz_A | 1 | 345 | 5 | 374 | 0.7534 |
0.8744 |
| 4opt-assembly1.cif.gz_A | 1 | 345 | 5 | 374 | 0.7522 |
0.8732 |
| 4opl-assembly1.cif.gz_A | 1 | 345 | 5 | 374 | 0.7513 |
0.8722 |
| 4opg-assembly1.cif.gz_A | 1 | 345 | 5 | 374 | 0.7512 |
0.8721 |
| 5bul-assembly1.cif.gz_A | 1 | 344 | 1 | 361 | 0.75 |
0.8261 |
| 5tuf-assembly2.cif.gz_B | 2 | 344 | 1 | 354 | 0.7415 |
0.8008 |
| 6n04-assembly2.cif.gz_B | 1 | 342 | 2 | 360 | 0.7408 |
0.798 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A7ZTP5-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9431 |
0.9586 |
| AF-Q3YWC2-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9426 |
0.9582 |
| AF-Q8XBZ8-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9423 |
0.9579 |
| AF-P31456-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9419 |
0.9576 |
| AF-Q329C3-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9402 |
0.956 |
| AF-Q0TB17-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9279 |
0.9583 |
| AF-Q1R4P6-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9279 |
0.9583 |
| AF-Q8CVK0-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9275 |
0.958 |
| AF-Q0SYN3-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9264 |
0.9571 |
| AF-A1AHM5-F1-model_v4 | 1 | 350 | 3 | 354 | 0.9259 |
0.9566 |