PROTEIN: HRGMv2_4729_6_15
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4729_6_15.pdb
Genome ID:
Protein ID:
HRGMv2_4729_6_15
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKSNIKIISF DLYDTLIQRI LPKEKIYLII EKKLNILDFA KKRIDAEKNI SNCQNGLYNL 60 NDIYSLIDID EISKNKALVL EEELEIQNTK MNYVGFDLYN KYSKKYQIIC ISDMYFSKNV 120 IARILEKNGY SNINNIFVSC ELMKSKRNRT IYSEVARILV VNNNEICHIG DSFRSDYCNA 180 IIAGVNSIYI GKNKKNNYSK KLEKEKYLEY LGYNIFGPLM FEFCCWIEKN CNTDNLLFLS 240 REGEIIFNCY NKIFENHGKM VYLSRKSVLS GITYDLIKKD KLSEIFNIIS IKRNETVFEL 300 INRLGIEKNI VNQELGEKLV NNSSIRELMN VFYINKNNIL SKLEVNSNLF KKYIEKEIYN 360 NSTFVDVGWN GSMQNLIELY YKINEININI NGLYLGCLNT VNKEGFLFNE ESKISNDIMN 420 YSGILELFLM PEYGSVIGYK NSKNEIVPVF DDIEFSDESM KNIKCIQKGI EQYVTQRKKI 480 CDKSLYTKDE LCTILNSVGL FPNKRDIDYI GNIDFYDNGK KYLLVNVSKK LKKNFIESKW 540 KVGFLKKLFK LKINYSVYLN FFRKLVDKNG KS 572
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 10 | 551 | 1 | 625 | 0.72 |
0.8115 |
| AF-Q0P8I2-F1-model_v4 | 1 | 564 | 95 | 975 | 0.5159 |
0.6755 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WAJ24550.1 | GT2 | 1 | 554 | 335 | 968 | 0.6162 |
0.8179 |
| A0A974WXG9 | GT4 | 1 | 569 | 426 | 1081 | 0.6109 |
0.8108 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 1 | 571 | 335 | 972 | 0.6056 |
0.7845 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 1 | 556 | 335 | 972 | 0.6004 |
0.7973 |
| U5MZQ8 | GT2 | 1 | 556 | 335 | 972 | 0.6004 |
0.7973 |
| AF-A0A078BDS9-F1-model_v4 | GT2 | 1 | 562 | 433 | 1015 | 0.6001 |
0.784 |
| A0A975E9I4 | GT2 | 1 | 561 | 425 | 1004 | 0.5991 |
0.7811 |
| UKD35065.1 | GT111 | 1 | 569 | 274 | 874 | 0.5877 |
0.7406 |
| A0A0U3BMS4 | GT111 | 1 | 572 | 307 | 925 | 0.5839 |
0.7391 |
| AF-A0A0U3BMS4-F1-model_v4 | GT111 | 1 | 572 | 307 | 925 | 0.5839 |
0.7391 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WAJ24550.1 | GT2 | 1 | 554 | 335 | 968 | 0.6162 |
0.8179 |
| A0A974WXG9 | GT4 | 1 | 569 | 426 | 1081 | 0.6109 |
0.8108 |
| U5MZQ8 | GT2 | 1 | 556 | 335 | 972 | 0.6004 |
0.7973 |
| A0A078BDS9 | GT2 | 1 | 562 | 433 | 1015 | 0.6001 |
0.784 |
| A0A975E9I4 | GT2 | 1 | 561 | 425 | 1004 | 0.5991 |
0.7811 |
| UKD35065.1 | GT111 | 1 | 569 | 274 | 874 | 0.5877 |
0.7406 |
| A0A0U3BMS4 | GT111 | 1 | 572 | 307 | 925 | 0.5839 |
0.7391 |
| A0A2I6S8V6 | GT2 | 1 | 568 | 386 | 1067 | 0.5643 |
0.7428 |
| WII09730.1 | GT111 | 1 | 559 | 394 | 943 | 0.5586 |
0.7251 |
| A0A1I7GMF6 | GT2 | 1 | 568 | 402 | 1083 | 0.5569 |
0.7365 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8a0m-assembly1.cif.gz_B | 2 | 564 | 124 | 873 | 0.5612 |
0.7199 |
| 8a0m-assembly2.cif.gz_D | 2 | 564 | 124 | 884 | 0.5437 |
0.7002 |
| 8a0m-assembly2.cif.gz_C | 2 | 565 | 123 | 1022 | 0.543 |
0.7288 |
| 8a0m-assembly1.cif.gz_A | 2 | 565 | 124 | 1021 | 0.5422 |
0.7274 |
| 8a0c-assembly1.cif.gz_A | 2 | 567 | 124 | 1025 | 0.5419 |
0.7255 |
| 8a0c-assembly1.cif.gz_B | 2 | 564 | 124 | 1022 | 0.5388 |
0.7244 |
| 7shg-assembly1.cif.gz_A | 25 | 513 | 20 | 591 | 0.4859 |
0.5806 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.