PROTEIN: HRGMv2_4727_4_12
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Protein File & Metadata
Source:
HRGMv2_4727_4_12.pdb
Genome ID:
Protein ID:
HRGMv2_4727_4_12
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Protein Sequence
MKKNEYKNSF IFILLLMTIF FNWVLPKAGT KISGIPLTIG ILLFAVLILF WIIKMINKKI 60 YFPKTAWYIL LSQLYFTIRV VILLGTGVQL TEIVTYAIPL IVFPFIFFII INEVNDKERY 120 KRIMNILVYG FLLLCIYSII QSIFGIAKTD IPGLTVNLTD YKTLGENWFL QKSNGITEEN 180 AKIVATYQNG NVLGVNLLIF FPIIYEYILD KNNNKFISLA TIALFVIVEL LTLSRSCWVG 240 VVAFIFFRIV CKDNKKIKDL LYKFFIIIVG IAVLLFILVK FPSIANRLLN IDMETFLQAS 300 GRTEGAIEFL NSTIQDGNIL INILIGPFGL IENKGLAYEM TQLAIYKVSG IIGLILWSIP 360 IFMIYKSLKH NNNIQYSYKI AILLWFLVAM IEGAYWTPPT AINLFIMLGL ALVNEKISKK 420 EDFEK 425
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I1M9-F1-model_v4 | 7 | 423 | 39 | 457 | 0.7455 |
0.8188 |
| AF-Q2G288-F1-model_v4 | 4 | 424 | 3 | 410 | 0.7355 |
0.777 |
| AF-P71238-F1-model_v4 | 2 | 422 | 1 | 405 | 0.7069 |
0.7499 |
| AF-H9L488-F1-model_v4 | 2 | 419 | 1 | 404 | 0.7042 |
0.7481 |
| AF-X8F0V5-F1-model_v4 | 7 | 425 | 40 | 465 | 0.7017 |
0.7709 |
| AF-Q5FA54-F1-model_v4 | 5 | 420 | 14 | 429 | 0.6148 |
0.747 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q4JZZ9-F1-model_v4 | GT4 | 7 | 421 | 6 | 406 | 0.7039 |
0.7545 |
| AF-G1FG65-F1-model_v4 | GT0 | 5 | 420 | 14 | 427 | 0.6151 |
0.7504 |
| AF-D2IX70-F1-model_v4 | GT1 | 30 | 422 | 112 | 501 | 0.6123 |
0.7319 |
| AF-E6U9X7-F1-model_v4 | GT0 | 5 | 424 | 5 | 427 | 0.5994 |
0.795 |
| AF-B8DZR6-F1-model_v4 | GT9 | 5 | 425 | 39 | 584 | 0.599 |
0.7877 |
| AF-B5YD26-F1-model_v4 | GT9 | 5 | 425 | 39 | 584 | 0.5979 |
0.7863 |
| AF-A0A386XPQ4-F1-model_v4 | GT0 | 4 | 424 | 29 | 454 | 0.5953 |
0.7967 |
| AF-B8IGI7-F1-model_v4 | GH16_7 | 7 | 424 | 17 | 460 | 0.5902 |
0.801 |
| AF-A0A346S464-F1-model_v4 | GT2 | 4 | 425 | 1 | 509 | 0.5902 |
0.7344 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 4 | 425 | 1 | 508 | 0.5883 |
0.7304 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 7 | 421 | 6 | 406 | 0.7039 |
0.7545 |
| D2IX70 | GT1 | 30 | 422 | 112 | 501 | 0.6123 |
0.7319 |
| B5YD26 | GT9 | 5 | 425 | 39 | 584 | 0.5979 |
0.7863 |
| B8IGI7 | GH16_7 | 7 | 424 | 17 | 460 | 0.5902 |
0.801 |
| D5MJ04 | GT9 | 5 | 425 | 22 | 564 | 0.5857 |
0.7668 |
| A0A517MXC4 | GT26 | 5 | 425 | 18 | 452 | 0.5838 |
0.7579 |
| K0J022 | GT4 | 4 | 425 | 1 | 758 | 0.5808 |
0.7561 |
| WBY01952.1 | GT9 | 1 | 425 | 8 | 560 | 0.5744 |
0.7451 |
| R4KL74 | GT4 | 2 | 425 | 2 | 859 | 0.5674 |
0.765 |
| D9S8K7 | GT4 | 3 | 425 | 7 | 786 | 0.5657 |
0.7437 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q00474-F1-model_v4 | 31 | 418 | 1 | 392 | 0.7344 |
0.7979 |
| AF-P37784-F1-model_v4 | 7 | 425 | 1 | 380 | 0.7285 |
0.7932 |
| AF-P71238-F1-model_v4 | 2 | 422 | 1 | 405 | 0.7069 |
0.7499 |
| AF-O32270-F1-model_v4 | 1 | 425 | 1 | 486 | 0.6901 |
0.7516 |
| AF-Q6F7F9-F1-model_v4 | 2 | 419 | 1 | 406 | 0.6444 |
0.7711 |
| AF-Q6FFS6-F1-model_v4 | 2 | 417 | 11 | 423 | 0.6409 |
0.7655 |