dbCAN Logo

PROTEIN: HRGMv2_4715_19_34

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4715_19_34.pdb
Genome ID:
HRGMv2_4715
Protein ID:
HRGMv2_4715_19_34

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MTDPPAPQTD   LDPEPNPALD   IAFLFIGGQH   QFLHGVPVAA   ALSRRPDMGV   TAYVNNHADA 60
VALADVLQAL   GAGTVAIIIL   ALPDWLVRPL   TKLDASGHFK   TPRLLWWNRR   LKRHDALMCL 120
ERTTTQLLRM   PGKCPPIIHI   PHGAGDRAKG   FERRLSLFDH   VIVAGEKDRA   RMIEEKLLRP 180
DQVSVSGSVK   LAGIRRLKGQ   PPRFFNNNRP   IILYNPHFDQ   SLASWESMGR   GLIARIAADG 240
RYNLIVAPHV   RLFEEADAAM   RRSWTNLVHP   DHVHIDLGSE   LSSDMSYTRA   ADIYIGDVSS 300
QIYEFLSHPR   PAIFLNAHHV   AWQEDKNYRM   WHFGEVIDSL   DDLIPALERA   PSLHPSYASV 360
QVEAVRQALG   AASLDGEARS   ADEIAADHII   ATIRGKTAL 399
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q2G2F5-F1-model_v4 18 396 1 368 0.706 0.7627
AF-Q2G1J3-F1-model_v4 18 396 1 368 0.705 0.7664
AF-Q0P9B2-F1-model_v4 17 399 1 364 0.7037 0.7648
AF-P27828-F1-model_v4 19 399 1 376 0.7029 0.747
AF-Q9L6R5-F1-model_v4 19 399 1 376 0.7024 0.7463
AF-Q329W5-F1-model_v4 14 399 10 390 0.6995 0.7465
AF-Q0P8T0-F1-model_v4 16 399 1 378 0.6974 0.7449
AF-Q2G2X4-F1-model_v4 15 397 25 367 0.6906 0.7845
AF-Q58899-F1-model_v4 19 394 1 365 0.6837 0.738
AF-Q32JS7-F1-model_v4 15 394 3 382 0.6573 0.6976
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A7D7ZG90-F1-model_v4 GT19 19 399 1 391 0.6692 0.7188
AF-W0PBB2-F1-model_v4 GT19 16 396 1 389 0.6511 0.6952
AF-I3UBZ4-F1-model_v4 GT19 17 395 1 389 0.6482 0.6954
A0A031JR47 GT4 17 399 3 377 0.6473 0.7026
AF-A0A031JR47-F1-model_v4 GT4 17 399 3 377 0.6473 0.7026
AF-A0A077DGQ4-F1-model_v4 GT19 17 393 1 381 0.645 0.6883
AF-Q2JT96-F1-model_v4 GT19 16 399 1 393 0.6449 0.6913
AF-A0A143IVG2-F1-model_v4 GT4 18 396 1 380 0.6446 0.6904
AF-A0A2Z5EA99-F1-model_v4 GT4 17 399 3 377 0.6445 0.6989
AF-A0A518CYK1-F1-model_v4 GT28 17 397 2 377 0.6398 0.685
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A4V0Z9M2 GT19 15 399 14 405 0.6583 0.7077
A0A031JR47 GT4 17 399 3 377 0.6473 0.7026
Q2JT96 GT19 16 399 1 393 0.6449 0.6913
WJK31369.1 GT4 19 399 1 360 0.6406 0.7007
A0A7D7S8S2 GT4 18 399 1 380 0.6402 0.6838
A0A518CYK1 GT28 17 397 2 377 0.6398 0.685
A0A2Z4G9X9 GT4 15 390 7 359 0.6391 0.7087
A0A6M8VYN4 GT19 15 395 15 396 0.6376 0.6934
A0A1L3R8Y7 GT4 1 399 1 389 0.6369 0.674
Q8KIC9 GT4 15 398 12 384 0.6364 0.6932
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7vz6-assembly1.cif.gz_F 15 399 1 365 0.7174 0.7717
7vza-assembly1.cif.gz_B 16 399 1 362 0.7171 0.7736
7vza-assembly1.cif.gz_E-2 15 399 1 360 0.7163 0.7746
7vz6-assembly1.cif.gz_C-2 15 399 1 359 0.7155 0.7748
7vz6-assembly1.cif.gz_D-2 15 399 1 362 0.7148 0.7717
7vza-assembly1.cif.gz_H-4 16 399 1 359 0.7145 0.7737
7vz6-assembly1.cif.gz_A 15 399 1 372 0.7142 0.7616
7vza-assembly1.cif.gz_G 16 399 1 359 0.7137 0.7728
7vz6-assembly1.cif.gz_B 15 399 1 357 0.7131 0.7741
7vza-assembly1.cif.gz_F-4 16 399 1 360 0.713 0.7713
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8Z388-F1-model_v4 19 399 1 376 0.7061 0.7487
AF-Q8XAR8-F1-model_v4 19 399 1 376 0.7034 0.7472
AF-P52641-F1-model_v4 18 395 1 375 0.7033 0.7473
AF-P27828-F1-model_v4 19 399 1 376 0.7029 0.747
AF-P39131-F1-model_v4 16 395 1 369 0.7028 0.762
AF-P58600-F1-model_v4 18 395 1 375 0.7027 0.7467
AF-Q9L6R5-F1-model_v4 19 399 1 376 0.7024 0.7463
AF-Q0P8T0-F1-model_v4 16 399 1 378 0.6974 0.7449
AF-Q8RKI8-F1-model_v4 17 397 25 383 0.694 0.7719
AF-Q2G2X4-F1-model_v4 15 397 25 367 0.6906 0.7845
Download Full SwissProt Results