PROTEIN: HRGMv2_4709_2_170
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Protein File & Metadata
Source:
HRGMv2_4709_2_170.pdb
Genome ID:
Protein ID:
HRGMv2_4709_2_170
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Protein Sequence
MDEKKEKQWF AAGAALLLLG LPASALAAES VPPVNPRIKT LAGEQADPVQ TAKAVQDPAF 60 SLHGNVRVFY ADMRVRLPGV NMKANAYTAN RRWQLYPSLV LSPAWKLTGM LEDNRYDRYV 120 GANDHREDNH LYLDRLYVTH ETDHGTRLIV GRDNIWPIEG NVVDLIVEGV RYGFGDASHE 180 GRVDLFAGRT VGYASRVDKE RRKGVVLSYD RKSGPWEGAL LYYGFHRDDD SVAMPVLTDF 240 TTAEAWQKTL DTQHIGELYT AYHFTPYVSL EFEGLYGYGM AKRVGYFPSW GDTRTGYVAT 300 LRLRQQPLDL RKTGDYGLWV SYYQMPRVTY LYPTIDPDVT VFGRDGFRGI GTRLDLVAGR 360 GLLLQVIYYN IKNRDENVSV LSLRPFAHAS ERLLGVQLRQ FW 402
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P43839-F1-model_v4 | 44 | 402 | 15 | 359 | 0.6911 |
0.772 |
| AF-A0A0H3GIV3-F1-model_v4 | 39 | 402 | 12 | 350 | 0.6575 |
0.7412 |
| AF-P21420-F1-model_v4 | 39 | 402 | 13 | 365 | 0.6565 |
0.7272 |
| AF-P02932-F1-model_v4 | 35 | 402 | 11 | 351 | 0.6552 |
0.7362 |
| AF-P37432-F1-model_v4 | 39 | 402 | 12 | 363 | 0.6544 |
0.7242 |
| AF-P37592-F1-model_v4 | 39 | 402 | 12 | 362 | 0.6542 |
0.7258 |
| AF-P30705-F1-model_v4 | 35 | 401 | 10 | 350 | 0.65 |
0.7303 |
| AF-Q32E50-F1-model_v4 | 38 | 402 | 12 | 362 | 0.649 |
0.7209 |
| AF-P02931-F1-model_v4 | 38 | 402 | 12 | 362 | 0.6489 |
0.7208 |
| AF-A0A0H3H0Y2-F1-model_v4 | 39 | 402 | 12 | 367 | 0.6455 |
0.7121 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8bym-assembly1.cif.gz_A | 54 | 402 | 12 | 321 | 0.736 |
0.8585 |
| 6ehe-assembly1.cif.gz_A | 56 | 402 | 1 | 302 | 0.6929 |
0.8018 |
| 3wi5-assembly1.cif.gz_A | 59 | 402 | 1 | 312 | 0.6786 |
0.7787 |
| 6ehf-assembly1.cif.gz_A | 56 | 402 | 1 | 318 | 0.6709 |
0.7607 |
| 4aui-assembly1.cif.gz_C | 59 | 402 | 1 | 308 | 0.6709 |
0.7722 |
| 6ehd-assembly1.cif.gz_A | 30 | 402 | 1 | 322 | 0.6707 |
0.7559 |
| 3wi4-assembly1.cif.gz_A | 59 | 402 | 1 | 309 | 0.6706 |
0.7721 |
| 5oyk-assembly1.cif.gz_A | 30 | 402 | 1 | 319 | 0.6671 |
0.7557 |
| 6ene-assembly1.cif.gz_C | 30 | 402 | 1 | 329 | 0.6637 |
0.7456 |
| 1pho-assembly1.cif.gz_A | 30 | 402 | 1 | 330 | 0.6628 |
0.7441 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P46027-F1-model_v4 | 43 | 402 | 14 | 371 | 0.7001 |
0.7678 |
| AF-Q48217-F1-model_v4 | 44 | 402 | 15 | 361 | 0.6941 |
0.7731 |
| AF-Q48221-F1-model_v4 | 43 | 402 | 14 | 353 | 0.6934 |
0.7788 |
| AF-P43839-F1-model_v4 | 44 | 402 | 15 | 359 | 0.6911 |
0.772 |
| AF-Q48216-F1-model_v4 | 44 | 402 | 15 | 360 | 0.6888 |
0.7692 |
| AF-Q48219-F1-model_v4 | 29 | 402 | 12 | 367 | 0.6866 |
0.7544 |
| AF-P46026-F1-model_v4 | 44 | 402 | 15 | 386 | 0.6848 |
0.7631 |
| AF-Q48218-F1-model_v4 | 44 | 402 | 15 | 369 | 0.6807 |
0.7515 |
| AF-Q48220-F1-model_v4 | 44 | 402 | 15 | 363 | 0.671 |
0.7474 |
| AF-P30690-F1-model_v4 | 54 | 402 | 15 | 331 | 0.6691 |
0.7784 |