PROTEIN: HRGMv2_4691_34_7
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Protein File & Metadata
Source:
HRGMv2_4691_34_7.pdb
Genome ID:
Protein ID:
HRGMv2_4691_34_7
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Protein Sequence
MRTKYAWFAA FTVLYAVLAA FVFWGTWSLS VVPVMPDCPI THPLDYTARL TRWTARWLET 60 GKFIPGDLTV FVGSPYFWQE LQYAVAAYFA ALGMVYFLRG RGLSRLAAYG GGLLLAFSGY 120 WFSLFSAGHL GWFQWMTYGV FAFGLADRAV RKGRARHWLL LGACLAWGSF YQPDLWLLFS 180 VLTGVYFVWC CIRERRLPGW KGMGLALAAF VLIGAVSFRS ALTGDLAGRD RQIAESKGTA 240 MGGGAAKSDD EARWIFTTNW SMPPEDTKEF FIPRIQGDTS CPMTLSFGRR AGRDVRPYEG 300 RLGRPLGAPS GNYRQHSLYV GWVTCLLALL GVVFIGIRRP SMTEDRPFLR SDAAFFAVAA 360 IVFWLFSMGR YCESVYRLVY ALPFGDYLRA PVKWHHLTEF CLVVLAAYGI DRLGRMDALR 420 GRVAQMALAA LVVFGAADLA RIDRLYCAPI DISLVRAKNP AADEIIRLGK GRVLDCVERG 480 IGLVAWSFTE RGIPLTGDAA DADVRYLWAS LSQLKTDRAL GEWVKTHRAR PVGTYRLTQE 540 GIRSAAMNES NMALFIVDSG RVVTEGEPLP KPQPLTVALG ILSLVGTLSV AGICLLLVRR 600 RM 602
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CD17-F1-model_v4 | 1 | 602 | 4 | 588 | 0.6516 |
0.6906 |
| AF-P96408-F1-model_v4 | 3 | 602 | 1 | 562 | 0.6438 |
0.6937 |
| AF-A0A133CH43-F1-model_v4 | 1 | 600 | 3 | 544 | 0.6265 |
0.6745 |
| AF-A0A5P3FT45-F1-model_v4 | 1 | 602 | 1 | 538 | 0.6227 |
0.6736 |
| AF-A0A133CFT8-F1-model_v4 | 1 | 602 | 2 | 533 | 0.6165 |
0.6762 |
| AF-A0A1S8IUA0-F1-model_v4 | 1 | 602 | 9 | 564 | 0.6155 |
0.6609 |
| AF-K0EV20-F1-model_v4 | 15 | 601 | 1 | 703 | 0.6023 |
0.6839 |
| AF-K0F1J6-F1-model_v4 | 14 | 602 | 1 | 716 | 0.5592 |
0.6374 |
| AF-A0A133CH37-F1-model_v4 | 27 | 602 | 1 | 449 | 0.5558 |
0.6593 |
| AF-K0F580-F1-model_v4 | 20 | 563 | 1 | 465 | 0.5341 |
0.6226 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WBL32474.1 | GT83 | 4 | 562 | 1 | 480 | 0.6304 |
0.7158 |
| AF-A6U781-F1-model_v4 | GT83 | 3 | 564 | 4 | 493 | 0.6233 |
0.7037 |
| AF-I0HXT4-F1-model_v4 | GT83 | 2 | 564 | 9 | 489 | 0.6225 |
0.7128 |
| A0A363RFN2 | GT83 | 2 | 565 | 7 | 510 | 0.6222 |
0.6957 |
| AF-A0A2U8FZ99-F1-model_v4 | GT83 | 2 | 564 | 3 | 494 | 0.6221 |
0.7012 |
| AF-A0A2Z3FZS2-F1-model_v4 | GT83 | 3 | 564 | 4 | 494 | 0.6217 |
0.7019 |
| AF-A0A249NPY1-F1-model_v4 | GT83 | 3 | 564 | 4 | 494 | 0.6216 |
0.7018 |
| AF-G9A2W0-F1-model_v4 | GT83 | 2 | 564 | 3 | 494 | 0.6215 |
0.7003 |
| AF-A0A249PQC4-F1-model_v4 | GT83 | 3 | 564 | 4 | 494 | 0.6215 |
0.7017 |
| AF-Q92R71-F1-model_v4 | GT83 | 3 | 564 | 4 | 495 | 0.6213 |
0.7007 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1Y0HA72 | GT83 | 1 | 558 | 11 | 488 | 0.6331 |
0.7262 |
| WBL32474.1 | GT83 | 4 | 562 | 1 | 480 | 0.6304 |
0.7158 |
| I0HXT4 | GT83 | 2 | 564 | 9 | 489 | 0.6225 |
0.7128 |
| A0A8D5JSU7 | GT83 | 1 | 564 | 3 | 491 | 0.621 |
0.7011 |
| UYZ58515.1 | GT83 | 1 | 557 | 17 | 502 | 0.6197 |
0.7135 |
| UTW03109.1 | GT83 | 3 | 571 | 6 | 506 | 0.6183 |
0.6943 |
| A0A7D4SZN4 | GT83 | 1 | 568 | 1 | 482 | 0.6175 |
0.7006 |
| UHS56076.1 | GT83 | 3 | 565 | 4 | 496 | 0.6174 |
0.6972 |
| Q2RT21 | GT83 | 3 | 566 | 21 | 528 | 0.6166 |
0.6961 |
| A0A2Z4Y6P6 | GT83 | 1 | 557 | 4 | 495 | 0.6163 |
0.6958 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MJ97-F1-model_v4 | 1 | 564 | 2 | 494 | 0.6198 |
0.6976 |
| AF-Q1MJ94-F1-model_v4 | 3 | 565 | 4 | 496 | 0.6098 |
0.6882 |
| AF-P42377-F1-model_v4 | 1 | 602 | 15 | 611 | 0.6075 |
0.6331 |
| AF-O34830-F1-model_v4 | 1 | 557 | 8 | 564 | 0.6031 |
0.6486 |
| AF-Q0P9C8-F1-model_v4 | 1 | 560 | 9 | 713 | 0.5232 |
0.6174 |
| AF-Q5HTX9-F1-model_v4 | 1 | 560 | 2 | 713 | 0.5232 |
0.6168 |