PROTEIN: HRGMv2_4599_2_235
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Protein File & Metadata
Source:
HRGMv2_4599_2_235.pdb
Genome ID:
Protein ID:
HRGMv2_4599_2_235
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Protein Sequence
MGTFKNALKR ILPPPVNSFM REVNRIISLE EKNQAMIQQL TKRVEQQEKV LQKQIEKIDR 60 QEQKFVQLLD EVEKKDLKIL EKSLEQQSNV LQHIKEQQNI IKKDTQAARV HAWQGQKNGD 120 EIIWAEIFNN VISNSSWLTN KSFSAGRWAV GYQYLYVVYR ILNEVRPKNI LELGLGQSTR 180 LFGQYAASDV EVQHIVVEHD PTWIQFFQQD FQLPSNSTII QLEREYRVFR EDDHVLAFKN 240 FKETFVGEKF DFISIDAPLG GEAVIYARVD ILELLPDVLA DSFIIVVDDF NRQGEKNTVA 300 VLEEILQENG ILYVKGVYAG KKDCIVICSE DLKYVKSM 338
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2U8FU38-F1-model_v4 | GT2 | 77 | 331 | 89 | 493 | 0.5299 |
0.8241 |
| AF-A0A5C1Q2D2-F1-model_v4 | GT2 | 83 | 329 | 107 | 484 | 0.5139 |
0.8156 |
| UTD55533.1 | GT4 | 77 | 338 | 382 | 666 | 0.4796 |
0.8097 |
| UBF29905.1 | GT2 | 86 | 331 | 60 | 436 | 0.4728 |
0.7208 |
| AF-A0A1B1A3Y8-F1-model_v4 | GT0 | 94 | 333 | 262 | 488 | 0.4375 |
0.7411 |
| A0A547B9R9 | GT0 | 115 | 331 | 283 | 496 | 0.4282 |
0.7733 |
| AF-A0A7R6VMF3-F1-model_v4 | GT2 | 121 | 332 | 1 | 322 | 0.4095 |
0.8223 |
| QKS22811.1 | GT4 | 94 | 330 | 206 | 670 | 0.3935 |
0.7276 |
| AF-A0A5P8VRV6-F1-model_v4 | GT4 | 121 | 338 | 384 | 629 | 0.3448 |
0.7297 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2U8FU38 | GT2 | 77 | 331 | 89 | 493 | 0.5299 |
0.8241 |
| UTD55533.1 | GT4 | 77 | 338 | 382 | 666 | 0.4796 |
0.8097 |
| UBF29905.1 | GT2 | 86 | 331 | 60 | 436 | 0.4728 |
0.7208 |
| A0A7R6VMF3 | GT2 | 121 | 332 | 1 | 322 | 0.4095 |
0.8223 |
| QKS22811.1 | GT4 | 94 | 330 | 206 | 670 | 0.3935 |
0.7276 |
| A0A1Z4I545 | GT4 | 89 | 337 | 217 | 933 | 0.3134 |
0.655 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5zw3-assembly1.cif.gz_B | 115 | 331 | 1 | 193 | 0.6118 |
0.7939 |
| 5zw3-assembly1.cif.gz_A | 112 | 331 | 1 | 207 | 0.5979 |
0.7559 |
| 5x7f-assembly1.cif.gz_A-2 | 116 | 330 | 1 | 198 | 0.595 |
0.7649 |
| 3cbg-assembly1.cif.gz_A-2 | 113 | 330 | 3 | 218 | 0.5874 |
0.7341 |
| 3tfw-assembly1.cif.gz_B-2 | 115 | 331 | 1 | 220 | 0.5867 |
0.7347 |
| 5n5d-assembly1.cif.gz_B | 112 | 331 | 1 | 222 | 0.5851 |
0.7298 |
| 4pca-assembly3.cif.gz_D-4 | 110 | 331 | 4 | 220 | 0.5843 |
0.7317 |
| 3duw-assembly1.cif.gz_B | 116 | 331 | 1 | 220 | 0.584 |
0.7357 |
| 4pca-assembly2.cif.gz_B | 114 | 330 | 4 | 217 | 0.5838 |
0.7359 |
| 4pca-assembly1.cif.gz_A | 110 | 331 | 4 | 221 | 0.5838 |
0.7291 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.