PROTEIN: HRGMv2_4577_9_34
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Protein File & Metadata
Source:
HRGMv2_4577_9_34.pdb
Genome ID:
Protein ID:
HRGMv2_4577_9_34
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Protein Sequence
MRTKNSLMNI SISIMSYGII MLGGFITRGK ITKILGMDFV GLNTYFEMVV SILAIAELGL 60 GVGIVYKLYK PIAEKQWDKV SVILCFLRRC YVFIAVIISS LALVSSYSVI TSVGEDFSKI 120 WLLKIYVLYI VDLLSSYLYS HKRSMFIADQ KSYVNNAIHI FAQLGMFVSQ ILVLNLFHSF 180 ELYLICRIIS RLAENIFISY KFNKKYNFIN LKTKENISGV EKKDLFKNIK ALLFHKISGF 240 GTNSISVFII MKVEKLRGAG IFSNYNLIST ALTTVTGEIF NGILASFGSL LGTSDRNKVY 300 KSFKMLYFLN FLMYSFITPT FICLITPFVV LWTGSNSIFP ISTAISIAAY LYIYGMRQSI 360 GMVKVSAGIY DQDKYLSLVG LFITCFSSYI LAPYLGVAGV MLGNILGMLL VPYWVQPYLV 420 YSEIFRKKSI LYHLKFVLYT ALTAAYCFIC YEVCNFIGNF EIVNQVSSFI KNLLGYMHVG 480 TNVNTSFIAQ IVINLAVCSL VPNILNIIIF FKTSEFKDLY AVAKSFTRRK K 531
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58467-F1-model_v4 | 1 | 529 | 1 | 507 | 0.8607 |
0.8951 |
| AF-Q2G262-F1-model_v4 | 1 | 531 | 1 | 476 | 0.8476 |
0.9074 |
| AF-H9L497-F1-model_v4 | 1 | 531 | 1 | 484 | 0.838 |
0.8984 |
| AF-P77377-F1-model_v4 | 1 | 531 | 1 | 485 | 0.8305 |
0.8896 |
| AF-A0A0H3GSJ3-F1-model_v4 | 1 | 531 | 1 | 478 | 0.8294 |
0.8888 |
| AF-Q32ET1-F1-model_v4 | 2 | 525 | 1 | 511 | 0.8071 |
0.8417 |
| AF-Q2G0R7-F1-model_v4 | 1 | 530 | 1 | 502 | 0.8059 |
0.8506 |
| AF-P0AF16-F1-model_v4 | 1 | 525 | 1 | 511 | 0.8055 |
0.8403 |
| AF-Q9I1M8-F1-model_v4 | 3 | 521 | 1 | 469 | 0.8012 |
0.867 |
| AF-Q23444-F1-model_v4 | 3 | 529 | 1 | 522 | 0.8007 |
0.8246 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 531 | 2 | 512 | 0.8291 |
0.8655 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 530 | 38 | 545 | 0.7991 |
0.8613 |
| QNU38870.1 | GT4 | 3 | 531 | 1 | 478 | 0.7241 |
0.8638 |
| QJC17489.1 | GT2 | 1 | 531 | 338 | 845 | 0.6904 |
0.891 |
| AF-A0A3T0RPT8-F1-model_v4 | GT4 | 1 | 531 | 2 | 582 | 0.6627 |
0.8217 |
| AF-A0A3Q9G719-F1-model_v4 | GT4 | 3 | 531 | 1 | 592 | 0.6613 |
0.8414 |
| AF-D1BIF1-F1-model_v4 | GT4 | 1 | 531 | 7 | 653 | 0.6579 |
0.8525 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 3 | 531 | 1 | 567 | 0.6481 |
0.8019 |
| AF-F9ZKY1-F1-model_v4 | GT2 | 1 | 525 | 17 | 515 | 0.6404 |
0.842 |
| A0A0C5BEZ8 | GT4 | 4 | 531 | 1 | 482 | 0.6403 |
0.885 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 531 | 2 | 512 | 0.8291 |
0.8655 |
| A0A160T2N7 | GT28 | 1 | 530 | 38 | 545 | 0.7991 |
0.8613 |
| QNU38870.1 | GT4 | 3 | 531 | 1 | 478 | 0.7241 |
0.8638 |
| QJC17489.1 | GT2 | 1 | 531 | 338 | 845 | 0.6904 |
0.891 |
| A0A3T0RPT8 | GT4 | 1 | 531 | 2 | 582 | 0.6627 |
0.8217 |
| A0A3Q9G719 | GT4 | 3 | 531 | 1 | 592 | 0.6613 |
0.8414 |
| D1BIF1 | GT4 | 1 | 531 | 7 | 653 | 0.6579 |
0.8525 |
| A0A2U8PPB3 | GT4 | 3 | 531 | 1 | 567 | 0.6481 |
0.8019 |
| F9ZKY1 | GT2 | 1 | 525 | 17 | 515 | 0.6404 |
0.842 |
| A0A0C5BEZ8 | GT4 | 4 | 531 | 1 | 482 | 0.6403 |
0.885 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7waw-assembly1.cif.gz_A | 11 | 523 | 1 | 496 | 0.7903 |
0.836 |
| 6nc6-assembly2.cif.gz_B | 7 | 521 | 1 | 461 | 0.7794 |
0.8503 |
| 7wag-assembly1.cif.gz_A | 3 | 526 | 1 | 513 | 0.7596 |
0.8007 |
| 6fhz-assembly1.cif.gz_A | 7 | 428 | 9 | 437 | 0.7442 |
0.8602 |
| 3wbn-assembly1.cif.gz_A | 1 | 426 | 3 | 446 | 0.6538 |
0.7625 |
| 5xjj-assembly1.cif.gz_A | 2 | 424 | 7 | 436 | 0.6531 |
0.7651 |
| 6gwh-assembly1.cif.gz_A | 1 | 426 | 3 | 435 | 0.6473 |
0.7475 |
| 3vvs-assembly1.cif.gz_A | 1 | 426 | 4 | 440 | 0.6435 |
0.7464 |
| 7php-assembly1.cif.gz_A | 2 | 426 | 8 | 442 | 0.6434 |
0.7557 |
| 6hfb-assembly4.cif.gz_D | 1 | 426 | 5 | 447 | 0.6418 |
0.7501 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71060-F1-model_v4 | 4 | 531 | 1 | 502 | 0.8679 |
0.9089 |
| AF-Q58467-F1-model_v4 | 1 | 529 | 1 | 507 | 0.8607 |
0.8951 |
| AF-Q48457-F1-model_v4 | 1 | 530 | 2 | 485 | 0.8472 |
0.9025 |
| AF-P33699-F1-model_v4 | 1 | 531 | 5 | 487 | 0.8322 |
0.8966 |
| AF-P77377-F1-model_v4 | 1 | 531 | 1 | 485 | 0.8305 |
0.8896 |
| AF-D4GU68-F1-model_v4 | 2 | 531 | 1 | 472 | 0.8289 |
0.8931 |
| AF-D4GYG8-F1-model_v4 | 2 | 529 | 1 | 476 | 0.8199 |
0.8812 |
| AF-O83529-F1-model_v4 | 1 | 531 | 2 | 526 | 0.8194 |
0.8441 |
| AF-O34674-F1-model_v4 | 2 | 529 | 1 | 538 | 0.8164 |
0.8472 |
| AF-O32273-F1-model_v4 | 1 | 531 | 3 | 483 | 0.8158 |
0.8752 |