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PROTEIN: HRGMv2_4573_34_5

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4573_34_5.pdb
Genome ID:
HRGMv2_4573
Protein ID:
HRGMv2_4573_34_5

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKETRTLVIG   TTALACGVTS   RLGADCTVVD   SGWSAGAEFA   DAMVAEPIDL   ARNRAPLSAA 60
LAEELWERNA   LSRTGEVHCP   ALAGAFAKRF   GAAGCRVLLG   TRVLGIARQA   DGFLVTLFLP 120
REGKTELYAE   RVIDTEPRTF   MEYRKTFSLM   LTGGIPQVGG   EGSPRVRHGR   FADESVLTFD 180
VPRDSTLPDA   QKIADRWLRE   NRARLGGAVV   AGPALAFGYR   FGAVVDVTRD   GVRYEPSASY 240
PDAVSAFEGG   ETLCL 255
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9HVD5-F1-model_v4 2 255 1 323 0.6701 0.7782
AF-Q9HU39-F1-model_v4 1 255 1 368 0.667 0.8048
AF-A7RDN6-F1-model_v4 2 255 1 338 0.6536 0.7739
AF-K0ERJ3-F1-model_v4 2 255 1 354 0.6479 0.7884
AF-P58525-F1-model_v4 2 255 1 353 0.647 0.7865
AF-Q9HXE3-F1-model_v4 1 255 1 349 0.6466 0.7865
AF-K0EX57-F1-model_v4 1 255 4 362 0.6465 0.7914
AF-Q9D826-F1-model_v4 1 255 5 366 0.6463 0.7957
AF-A0A0H3GRF7-F1-model_v4 2 255 1 353 0.6451 0.7846
AF-Q9P0Z9-F1-model_v4 1 255 2 366 0.6449 0.7944
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A481YWN0 GT2 3 255 286 679 0.5192 0.7693
AF-A0A5B8N322-F1-model_v4 GT4 1 255 393 733 0.5161 0.7784
AF-A0A517ZI15-F1-model_v4 GH0 1 255 22 505 0.5127 0.8114
AF-A0A5B9W5P0-F1-model_v4 GT4 1 255 375 827 0.5103 0.8018
AF-A0A2D2DPG9-F1-model_v4 GT4 1 255 407 873 0.5051 0.7941
AF-A0A2D2DIC4-F1-model_v4 GT4 1 255 406 873 0.505 0.7936
UKS28015.1 GH63 1 255 3 397 0.5032 0.8163
AF-A0A212PKV0-F1-model_v4 GT4 1 255 386 836 0.4994 0.7795
UKZ76834.1 GH93 1 255 2 326 0.4798 0.758
A0A8S2A986 GT2 1 255 564 880 0.4778 0.7645
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A481YWN0 GT2 3 255 286 679 0.5192 0.7693
A0A5B8N322 GT4 1 255 393 733 0.5161 0.7784
A0A5B9W5P0 GT4 1 255 375 827 0.5103 0.8018
UKS28015.1 GH63 1 255 3 397 0.5032 0.8163
WAO95523.1 GH13_1 3 255 494 876 0.4889 0.7797
UKZ76834.1 GH93 1 255 2 326 0.4798 0.758
A0A8S2A986 GT2 1 255 564 880 0.4778 0.7645
A0A291B0A8 GH36 1 255 721 1089 0.4748 0.7962
A0A7H8QSX6 GH63 3 255 6 383 0.4735 0.8045
WIA13184.1 GH13_18 3 255 1 379 0.4652 0.7568
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4zcc-assembly2.cif.gz_B 3 255 1 315 0.6741 0.7779
4zcc-assembly2.cif.gz_C 3 255 1 314 0.6739 0.7791
4zcd-assembly2.cif.gz_A 3 255 1 318 0.6716 0.7788
3kkj-assembly1.cif.gz_B 3 255 1 322 0.6676 0.779
3qj4-assembly1.cif.gz_A 2 255 1 331 0.664 0.7794
4zcd-assembly3.cif.gz_B 3 255 1 321 0.6619 0.7721
4ysh-assembly1.cif.gz_A 1 255 1 351 0.6599 0.798
3dme-assembly1.cif.gz_B 2 255 1 365 0.659 0.7971
4x9n-assembly1.cif.gz_A 1 255 1 365 0.6508 0.7993
2q6u-assembly1.cif.gz_A 2 255 1 369 0.6504 0.7999
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5L2C2-F1-model_v4 1 255 2 353 0.6553 0.7974
AF-Q8TVE9-F1-model_v4 2 255 1 302 0.6515 0.7951
AF-Q669J9-F1-model_v4 2 255 1 353 0.6506 0.7909
AF-B5RBE0-F1-model_v4 2 255 1 353 0.6477 0.7873
AF-B5QY05-F1-model_v4 2 255 1 353 0.6475 0.7871
AF-F2JXJ2-F1-model_v4 1 255 1 314 0.6475 0.7835
AF-B5FL04-F1-model_v4 2 255 1 353 0.6473 0.7868
AF-A9MH03-F1-model_v4 2 255 1 353 0.6472 0.7868
AF-B4T2Z2-F1-model_v4 2 255 1 353 0.6471 0.7866
AF-B5F947-F1-model_v4 2 255 1 353 0.647 0.7866
Download Full SwissProt Results