dbCAN Logo

PROTEIN: HRGMv2_4569_18_38

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4569_18_38.pdb
Genome ID:
HRGMv2_4569
Protein ID:
HRGMv2_4569_18_38

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKRVIFNLPA   QPGAEYPNGG   TEGYWIGKIA   DRAIQLLSAG   GEVEAARVSP   EDPRQPGSPG 60
ECSLYISLRS   QTAPPEAAGQ   RKGLDVCYAE   HSADGKLAAE   KFAARLKETY   PQPELAGPRP 120
VAEAETTPMK   DVPVLLIKLA   YHDNPQDEAW   LTNGTEEIAE   KLLQAIQEVL   EVPVERPEAD 180
HA 182
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-X8F2Y6-F1-model_v4 2 172 1 210 0.7337 0.8637
AF-I6Y4D2-F1-model_v4 1 172 26 236 0.7032 0.8631
AF-Q9CB75-F1-model_v4 1 172 41 251 0.6863 0.8627
AF-P36548-F1-model_v4 1 172 56 278 0.6578 0.8658
AF-P33772-F1-model_v4 1 172 56 278 0.6565 0.8641
AF-Q32DB8-F1-model_v4 1 172 56 278 0.6562 0.8638
AF-A0A0H3GWG2-F1-model_v4 1 172 57 279 0.6561 0.8647
AF-Q2FXU3-F1-model_v4 1 172 119 291 0.6355 0.8385
AF-A0A132P824-F1-model_v4 1 171 128 303 0.6317 0.8507
AF-K0FF30-F1-model_v4 1 177 161 364 0.6217 0.8685
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9X8CFF6 CBM50 1 182 1 222 0.7581 0.8594
AF-A0A1B3XN79-F1-model_v4 CBM50 1 182 1 226 0.7424 0.8481
AF-A0A223ECN6-F1-model_v4 CBM50 1 180 1 185 0.7327 0.8451
AF-A0A3Q9RNL4-F1-model_v4 CBM50 1 182 1 188 0.732 0.8375
AF-U5L4F7-F1-model_v4 CBM50 1 180 1 185 0.7316 0.8437
AF-A0A5B8Z8B8-F1-model_v4 CBM50 1 180 1 185 0.7313 0.8438
A0A6B9SZH0 CBM50 1 182 2 214 0.7211 0.8377
USK61356.1 CBM50 1 180 10 198 0.7202 0.8521
A0A5Q2W7S0 CBM50 1 177 1 184 0.7156 0.8473
AF-A0A410DQK5-F1-model_v4 CBM50 1 182 3 215 0.7143 0.8211
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9X8CFF6 CBM50 1 182 1 222 0.7581 0.8594
A0A6B9SZH0 CBM50 1 182 2 214 0.7211 0.8377
USK61356.1 CBM50 1 180 10 198 0.7202 0.8521
A0A5Q2W7S0 CBM50 1 177 1 184 0.7156 0.8473
A0A3R5QVT6 CBM50 1 182 4 188 0.7089 0.8169
USK71780.1 CBM50 1 182 3 184 0.6929 0.7983
UYT83942.1 CBM50 1 182 1 221 0.6843 0.8479
A0A5J6TA99 CBM50 1 182 6 209 0.6807 0.8668
U5PW24 CBM50 1 182 1 259 0.6761 0.8595
A0A9E8S4I8 CBM50 1 180 2 194 0.6716 0.8683
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1jwq-assembly1.cif.gz_A 1 173 1 179 0.8091 0.8683
4rn7-assembly1.cif.gz_A 1 172 3 184 0.7938 0.8728
5emi-assembly1.cif.gz_A 1 172 4 180 0.7907 0.856
4m6i-assembly2.cif.gz_B 1 172 4 173 0.7829 0.8419
4m6i-assembly1.cif.gz_A 1 172 3 184 0.7788 0.8531
7tj4-assembly2.cif.gz_D 1 171 4 175 0.7779 0.8368
3czx-assembly1.cif.gz_A 1 175 3 182 0.7727 0.8309
4m6h-assembly1.cif.gz_A 1 172 3 189 0.7719 0.8563
7rag-assembly1.cif.gz_B-2 1 172 1 196 0.7686 0.8666
8c0j-assembly2.cif.gz_C 1 172 2 194 0.7597 0.8579
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P54525-F1-model_v4 1 172 29 206 0.7457 0.8571
AF-Q89A33-F1-model_v4 2 172 1 211 0.7263 0.8587
AF-P37134-F1-model_v4 1 182 1 232 0.7054 0.8389
AF-P57638-F1-model_v4 1 172 4 230 0.7045 0.8598
AF-P50864-F1-model_v4 1 172 40 231 0.704 0.8586
AF-I6Y4D2-F1-model_v4 1 172 26 236 0.7032 0.8631
AF-P36548-F1-model_v4 1 172 56 278 0.6578 0.8658
AF-P33772-F1-model_v4 1 172 56 278 0.6565 0.8641
AF-Q5HNS0-F1-model_v4 1 172 119 291 0.6379 0.8417
AF-Q4L6X7-F1-model_v4 1 172 119 291 0.6378 0.8413
Download Full SwissProt Results