PROTEIN: HRGMv2_4534_55_3
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Protein File & Metadata
Source:
HRGMv2_4534_55_3.pdb
Genome ID:
Protein ID:
HRGMv2_4534_55_3
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Protein Sequence
MKETAERRAE RYKRILEEND RLKIPADGFH LAGGNALPAA AKLVLAPVLA DFVLWLLRHA 60 LADGIRRLYF LARDGYFMYH ASRFLREKFE LPIECRYLSC SRFSLRVPMF HLDRQAALDY 120 ICRGGIDVTI ERILTRAGLN IGEQQKVLEK LPFSFQSGKI LTQREREEFR RFLEGCKEFS 180 EAADARSRRA MPDTAGYLKQ EGLLEENVPS AVVDSGWMGS MQETLNLLLF QLGRKKKLSG 240 YYWGLYDFPL KAAGEHYRCY FFTPARGLKE KIFFNNCLFE VVFSAPHGMT MCYRREGERF 300 LPCYGNIDEK KKGFLYQEEE IFRQYMGMFA QTLKKDSFFE EEQFDGRKTI KKLLRLFMAR 360 PAWEEAEGLG TLPFSDDVLD DCERILAPLL TERNLKEGHL PHQLFVHLGF QNPGAGGTAW 420 YEGSVVRTGK KVEWHLFHYR CYQLFRYWKK QIKFRRERGG 460
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 13 | 437 | 207 | 631 | 0.6428 |
0.8091 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 14 | 453 | 638 | 1091 | 0.5765 |
0.8483 |
| A0A974WXG9 | GT4 | 1 | 442 | 187 | 1075 | 0.5728 |
0.8409 |
| A0A1I7GMF6 | GT2 | 13 | 448 | 633 | 1083 | 0.5728 |
0.848 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 13 | 452 | 617 | 1067 | 0.5728 |
0.8371 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 5 | 445 | 5 | 403 | 0.5552 |
0.7574 |
| A0A9J7AXY3 | GT2 | 2 | 460 | 2 | 504 | 0.5476 |
0.6906 |
| V4JBH5 | GT2 | 4 | 447 | 1 | 397 | 0.5406 |
0.7849 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 29 | 445 | 6 | 405 | 0.5388 |
0.7896 |
| QRK05458.1 | GT4 | 15 | 460 | 249 | 992 | 0.5366 |
0.798 |
| AF-A0A1D7XMN6-F1-model_v4 | GT2 | 2 | 446 | 321 | 969 | 0.5246 |
0.7514 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 442 | 187 | 1075 | 0.5728 |
0.8409 |
| A0A1I7GMF6 | GT2 | 13 | 448 | 633 | 1083 | 0.5728 |
0.848 |
| A0A2I6S8V6 | GT2 | 13 | 452 | 617 | 1067 | 0.5728 |
0.8371 |
| A0A0U5F758 | GT2 | 5 | 445 | 5 | 403 | 0.5552 |
0.7574 |
| A0A9J7AXY3 | GT2 | 2 | 460 | 2 | 504 | 0.5476 |
0.6906 |
| V4JBH5 | GT2 | 4 | 447 | 1 | 397 | 0.5406 |
0.7849 |
| A0A0H3KC95 | GT2 | 29 | 445 | 6 | 405 | 0.5388 |
0.7896 |
| QRK05458.1 | GT4 | 15 | 460 | 249 | 992 | 0.5366 |
0.798 |
| A6M2M4 | GT2 | 6 | 458 | 210 | 916 | 0.5224 |
0.7946 |
| A0A975E9I4 | GT2 | 1 | 437 | 409 | 1004 | 0.5218 |
0.7538 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 17 | 372 | 241 | 591 | 0.569 |
0.831 |
| 8a0m-assembly1.cif.gz_B | 7 | 441 | 458 | 876 | 0.5361 |
0.7943 |
| 8a0c-assembly1.cif.gz_A | 7 | 443 | 596 | 1027 | 0.5259 |
0.7913 |
| 8a0m-assembly2.cif.gz_C | 7 | 441 | 592 | 1024 | 0.5255 |
0.7878 |
| 8a0m-assembly1.cif.gz_A | 7 | 441 | 591 | 1023 | 0.5246 |
0.7865 |
| 8a0c-assembly1.cif.gz_B | 7 | 441 | 596 | 1025 | 0.5208 |
0.7863 |
| 8a0m-assembly2.cif.gz_D | 7 | 441 | 487 | 887 | 0.5064 |
0.7823 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.