PROTEIN: HRGMv2_4533_137_2
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4533_137_2.pdb
Genome ID:
Protein ID:
HRGMv2_4533_137_2
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MEPMIPWRKT HRLLCEAGER ALCRCGGQGA AEETAARVTA PVFYGFCRWV LETTQKRGWK 60 RLYFLARDGW LLRQICEELC RQEGWDMDCR YLYVSRLALR KACFHLTRDW EQLFQPALHT 120 TLRGILSRMG LDAGRCGEWG LEKEELDKPL LREELFKMQK RPSQNDAFSK AVLSVSEEAF 180 KPAMKYFEQE GLLDGEKIVL VDTGWTGSMQ RTLRILLESG GWKGEISGLY FGLYVPPVSA 240 ADGEYQSWYF APESSAGKKA SLCNNVVEAM CAAPHGMTLG YEEKNGRWEP VLAQSRGSRQ 300 AVFRRRDMVL AFCREMQGMC CPKEELLACA RRMMGKLCKN PSVSQALAFA GVLFCDDVGE 360 GYLSPLAVPV SRRVLREYTV FHRLKKGKKP KPLFWPEGCL ALSPVKWQGW YRLNLYGWEL 420 LRQLYQKRQG K 431
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 1 | 413 | 209 | 631 | 0.673 |
0.8405 |
| AF-Q0P8I2-F1-model_v4 | 1 | 421 | 410 | 975 | 0.486 |
0.7033 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 1 | 428 | 618 | 1067 | 0.6045 |
0.8702 |
| AF-W0DNV7-F1-model_v4 | GT2 | 1 | 429 | 637 | 1091 | 0.603 |
0.8718 |
| A0A1I7GMF6 | GT2 | 1 | 424 | 631 | 1083 | 0.601 |
0.8766 |
| A0A974WXG9 | GT4 | 1 | 418 | 481 | 1075 | 0.5894 |
0.8749 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 26 | 421 | 8 | 403 | 0.5713 |
0.7591 |
| QRK05458.1 | GT4 | 1 | 431 | 235 | 988 | 0.5602 |
0.8248 |
| A0A9J7AXY3 | GT2 | 27 | 427 | 7 | 399 | 0.5583 |
0.7822 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 22 | 421 | 4 | 405 | 0.5537 |
0.7827 |
| V4JBH5 | GT2 | 27 | 423 | 3 | 397 | 0.5534 |
0.78 |
| AF-M4S1R1-F1-model_v4 | GT4 | 1 | 421 | 205 | 723 | 0.5468 |
0.7934 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 1 | 428 | 618 | 1067 | 0.6045 |
0.8702 |
| A0A1I7GMF6 | GT2 | 1 | 424 | 631 | 1083 | 0.601 |
0.8766 |
| A0A974WXG9 | GT4 | 1 | 418 | 481 | 1075 | 0.5894 |
0.8749 |
| A0A0U5F758 | GT2 | 26 | 421 | 8 | 403 | 0.5713 |
0.7591 |
| QRK05458.1 | GT4 | 1 | 431 | 235 | 988 | 0.5602 |
0.8248 |
| A0A9J7AXY3 | GT2 | 27 | 427 | 7 | 399 | 0.5583 |
0.7822 |
| A0A0H3KC95 | GT2 | 22 | 421 | 4 | 405 | 0.5537 |
0.7827 |
| V4JBH5 | GT2 | 27 | 423 | 3 | 397 | 0.5534 |
0.78 |
| M4S1R1 | GT4 | 1 | 421 | 205 | 723 | 0.5468 |
0.7934 |
| A6M2M4 | GT2 | 1 | 431 | 50 | 916 | 0.5454 |
0.832 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 4 | 352 | 239 | 591 | 0.5832 |
0.8288 |
| 8a0m-assembly1.cif.gz_B | 1 | 417 | 289 | 876 | 0.5662 |
0.8101 |
| 8a0c-assembly1.cif.gz_A | 1 | 417 | 427 | 1028 | 0.5608 |
0.8374 |
| 8a0m-assembly2.cif.gz_C | 1 | 417 | 423 | 1024 | 0.5599 |
0.8351 |
| 8a0m-assembly1.cif.gz_A | 1 | 417 | 422 | 1023 | 0.5594 |
0.8341 |
| 8a0c-assembly1.cif.gz_B | 1 | 414 | 427 | 1026 | 0.5517 |
0.8286 |
| 8a0m-assembly2.cif.gz_D | 1 | 417 | 318 | 887 | 0.5338 |
0.7664 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.