PROTEIN: HRGMv2_4531_4_5
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Protein File & Metadata
Source:
HRGMv2_4531_4_5.pdb
Genome ID:
Protein ID:
HRGMv2_4531_4_5
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Protein Sequence
MSYLFEMHYH TPQTSYCGHI PPAEALPKYK EAGYAGVVVT DHFYKEWFDD RGEIPWEEKI 60 DRWLAGYRAA EEAARTLEDF TVILGMELRF TDNINDHLVY GIDEALLKEN PELYLMTPAE 120 FRRFADAHGL FFAQAHPFRS VCTPRDPAVL HGVEIYNGNG RHNSHNHKAQ AFAEENGLIA 180 LSGSDFHEWE DLCMGGTYLR ERPDDSKSLA RLLFAGGVEG FARGE 225
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57860-F1-model_v4 | 3 | 225 | 1 | 215 | 0.6721 |
0.7415 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B3DWM3-F1-model_v4 | GT28 | 1 | 225 | 398 | 627 | 0.5135 |
0.7711 |
| AF-A0A0C1UQM4-F1-model_v4 | GT28 | 1 | 225 | 398 | 627 | 0.5112 |
0.7676 |
| AF-A0A5B8UDB4-F1-model_v4 | GT4 | 1 | 225 | 388 | 587 | 0.5077 |
0.8415 |
| AF-D3FAF3-F1-model_v4 | GT4 | 1 | 225 | 406 | 603 | 0.5046 |
0.85 |
| WCB91666.1 | GT4 | 1 | 225 | 425 | 624 | 0.5025 |
0.8461 |
| AF-A0A1M6T7D6-F1-model_v4 | GT4 | 1 | 225 | 4 | 244 | 0.5004 |
0.7781 |
| AF-W0DIC7-F1-model_v4 | GT4 | 1 | 225 | 4 | 244 | 0.4989 |
0.7745 |
| AF-A0A5B8U4C2-F1-model_v4 | GT4 | 1 | 225 | 5 | 312 | 0.4961 |
0.7748 |
| AF-D0LZR8-F1-model_v4 | GT4 | 1 | 225 | 6 | 248 | 0.496 |
0.7857 |
| AF-C1DVV9-F1-model_v4 | GT4 | 2 | 225 | 1 | 237 | 0.4938 |
0.776 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WCB91666.1 | GT4 | 1 | 225 | 425 | 624 | 0.5025 |
0.8461 |
| A0A510HLQ9 | GT4 | 1 | 225 | 4 | 247 | 0.4962 |
0.7734 |
| D0LZR8 | GT4 | 1 | 225 | 6 | 248 | 0.496 |
0.7857 |
| A0A1H2ECD2 | GT28 | 1 | 225 | 482 | 711 | 0.4937 |
0.7693 |
| QJR21458.1 | GT4 | 2 | 225 | 1 | 241 | 0.4931 |
0.7792 |
| E4TFF8 | GT4 | 2 | 225 | 1 | 241 | 0.493 |
0.7768 |
| F8AAV1 | GT4 | 1 | 225 | 4 | 244 | 0.4919 |
0.7696 |
| A0A3R5UZG1 | GT4 | 1 | 225 | 8 | 249 | 0.4918 |
0.7792 |
| A0A0G3EMM6 | GT4 | 1 | 225 | 6 | 349 | 0.4901 |
0.7795 |
| B3E3B9 | GT4 | 1 | 225 | 4 | 244 | 0.4889 |
0.7762 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2anu-assembly1.cif.gz_A | 1 | 225 | 2 | 223 | 0.745 |
0.7838 |
| 2anu-assembly1.cif.gz_B | 1 | 225 | 2 | 220 | 0.7445 |
0.7885 |
| 2anu-assembly1.cif.gz_C | 1 | 225 | 2 | 222 | 0.7444 |
0.7835 |
| 2anu-assembly2.cif.gz_F | 1 | 225 | 2 | 223 | 0.7431 |
0.7818 |
| 7rty-assembly2.cif.gz_B | 1 | 225 | 2 | 227 | 0.7304 |
0.7831 |
| 7ug9-assembly1.cif.gz_A | 4 | 217 | 1 | 206 | 0.6798 |
0.7368 |
| 3e38-assembly1.cif.gz_B | 1 | 225 | 17 | 241 | 0.6218 |
0.7653 |
| 3e0f-assembly1.cif.gz_A | 3 | 213 | 5 | 281 | 0.5999 |
0.7303 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57860-F1-model_v4 | 3 | 225 | 1 | 215 | 0.6721 |
0.7415 |
| AF-P38423-F1-model_v4 | 1 | 225 | 2 | 317 | 0.5798 |
0.7469 |
| AF-Q8YEK2-F1-model_v4 | 1 | 208 | 1 | 258 | 0.4155 |
0.7493 |
| AF-Q57FU7-F1-model_v4 | 1 | 208 | 1 | 258 | 0.4154 |
0.7491 |
| AF-Q8G381-F1-model_v4 | 1 | 208 | 1 | 258 | 0.4151 |
0.7486 |