PROTEIN: HRGMv2_4436_11_28
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Protein File & Metadata
Source:
HRGMv2_4436_11_28.pdb
Genome ID:
Protein ID:
HRGMv2_4436_11_28
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Protein Sequence
MENNFSIIIS TCDKFSDLWD AHILLLNQNW ADRNVETFLV TDKPTDRTFE NVTVVAAGEG 60 TEITERLRAV MPLIKTEYVL FTLDDYFLTE RISTQAINED IQIMEKHQID YLRLFVMTMK 120 SLRNRKAEEL EPNIFLLDNY AGDYIVSLYA GIWRKEFMEK TLTKTLNAWQ YEVALTNMAR 180 QLNARCADSR RGEFPILDVI RKGKVLTKAR KYFDGNPIYK GDREDMRAKD EWMLEFRTWL 240 REWLPKPLFN LSKAIMRRRG YTFFSDNQ 268
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q48215-F1-model_v4 | 1 | 263 | 1 | 258 | 0.6012 |
0.6453 |
| AF-O14466-F1-model_v4 | 1 | 268 | 1 | 229 | 0.598 |
0.6768 |
| AF-Q9VIU7-F1-model_v4 | 1 | 268 | 3 | 232 | 0.5979 |
0.6805 |
| AF-Q9I5M1-F1-model_v4 | 1 | 261 | 14 | 298 | 0.5961 |
0.664 |
| AF-K0F1F2-F1-model_v4 | 1 | 261 | 1 | 267 | 0.593 |
0.6442 |
| AF-Q48214-F1-model_v4 | 4 | 261 | 1 | 283 | 0.5901 |
0.6603 |
| AF-O24928-F1-model_v4 | 1 | 245 | 1 | 245 | 0.5884 |
0.6535 |
| AF-P9WMX7-F1-model_v4 | 2 | 264 | 2 | 234 | 0.5878 |
0.6799 |
| AF-Q0P9A9-F1-model_v4 | 2 | 267 | 1 | 268 | 0.5868 |
0.6207 |
| AF-I1KLS1-F1-model_v4 | 1 | 268 | 8 | 234 | 0.5843 |
0.6761 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0EX95-F1-model_v4 | GT2 | 1 | 268 | 3 | 251 | 0.6815 |
0.7395 |
| AF-A0A1H1VV24-F1-model_v4 | GT2 | 1 | 268 | 3 | 249 | 0.679 |
0.7462 |
| AF-A0A6I4I4J3-F1-model_v4 | GT2 | 1 | 268 | 5 | 256 | 0.6786 |
0.7333 |
| AF-A0A5C0ZRT4-F1-model_v4 | GT2 | 1 | 268 | 3 | 249 | 0.6783 |
0.7441 |
| AF-A0A514ZYU9-F1-model_v4 | GT2 | 1 | 268 | 6 | 248 | 0.6781 |
0.7508 |
| AF-A0A2K8Z7B4-F1-model_v4 | GT2 | 1 | 268 | 4 | 249 | 0.6772 |
0.7437 |
| AF-A0A6I4HVP9-F1-model_v4 | GT2 | 1 | 268 | 5 | 257 | 0.6771 |
0.7315 |
| AF-A0A127V7G3-F1-model_v4 | GT2 | 1 | 268 | 7 | 259 | 0.6755 |
0.7302 |
| AF-A0A0N7HWQ3-F1-model_v4 | GT2 | 1 | 268 | 9 | 251 | 0.6746 |
0.7507 |
| AF-A0A6P1VSF8-F1-model_v4 | GT2 | 1 | 268 | 6 | 253 | 0.6746 |
0.7372 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1N7REQ1 | GT2 | 1 | 268 | 7 | 249 | 0.6706 |
0.7537 |
| UBM60722.1 | GT2 | 1 | 268 | 4 | 250 | 0.6677 |
0.738 |
| A0A0P0CK37 | GT2 | 1 | 268 | 9 | 259 | 0.6632 |
0.7308 |
| A0A9X1TSK9 | GT2 | 1 | 268 | 11 | 257 | 0.6583 |
0.7325 |
| UFH54288.1 | GT2 | 1 | 268 | 4 | 249 | 0.6557 |
0.7439 |
| A0A517NDF8 | GT12 | 1 | 266 | 8 | 242 | 0.639 |
0.713 |
| A0A223KME2 | GT2 | 4 | 243 | 1 | 221 | 0.6361 |
0.7407 |
| K0B2B0 | GT2 | 1 | 268 | 1 | 215 | 0.6348 |
0.7437 |
| A0A6M3KCV1 | GT2 | 1 | 268 | 1 | 202 | 0.6334 |
0.7576 |
| USR76600.1 | GT12 | 1 | 264 | 4 | 258 | 0.633 |
0.6874 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5z8b-assembly1.cif.gz_A | 3 | 231 | 1 | 209 | 0.612 |
0.7124 |
| 2y6p-assembly2.cif.gz_C-2 | 5 | 216 | 1 | 229 | 0.6035 |
0.7215 |
| 3juk-assembly1.cif.gz_B | 1 | 217 | 1 | 263 | 0.5912 |
0.7364 |
| 3juk-assembly1.cif.gz_D | 1 | 217 | 1 | 261 | 0.5901 |
0.7368 |
| 3juj-assembly1.cif.gz_D | 1 | 217 | 1 | 269 | 0.5839 |
0.7392 |
| 3bcv-assembly1.cif.gz_B | 2 | 190 | 1 | 196 | 0.5823 |
0.7168 |
| 2e3d-assembly1.cif.gz_D | 1 | 217 | 1 | 260 | 0.5797 |
0.7399 |
| 4d48-assembly1.cif.gz_B | 1 | 217 | 1 | 267 | 0.579 |
0.7446 |
| 8b31-assembly1.cif.gz_B | 1 | 217 | 1 | 268 | 0.5777 |
0.7484 |
| 4d48-assembly1.cif.gz_A | 1 | 217 | 1 | 266 | 0.5765 |
0.7398 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A1KMV1-F1-model_v4 | 2 | 248 | 2 | 256 | 0.6251 |
0.6864 |
| AF-Q03084-F1-model_v4 | 1 | 263 | 4 | 263 | 0.6143 |
0.6629 |
| AF-A6GYA2-F1-model_v4 | 3 | 216 | 1 | 241 | 0.6108 |
0.7392 |
| AF-O66914-F1-model_v4 | 3 | 216 | 1 | 234 | 0.61 |
0.7289 |
| AF-A5FBA3-F1-model_v4 | 3 | 218 | 1 | 243 | 0.6092 |
0.7358 |
| AF-Q46635-F1-model_v4 | 1 | 263 | 1 | 256 | 0.6073 |
0.6549 |
| AF-Q0HDC7-F1-model_v4 | 1 | 217 | 1 | 195 | 0.6062 |
0.7282 |
| AF-A0M2E8-F1-model_v4 | 1 | 217 | 5 | 248 | 0.6052 |
0.7324 |
| AF-Q48215-F1-model_v4 | 1 | 263 | 1 | 258 | 0.6012 |
0.6453 |
| AF-P0A598-F1-model_v4 | 1 | 268 | 2 | 215 | 0.5991 |
0.6953 |