PROTEIN: HRGMv2_4435_5_34
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Protein File & Metadata
Source:
HRGMv2_4435_5_34.pdb
Genome ID:
Protein ID:
HRGMv2_4435_5_34
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Protein Sequence
MAVFTNQAKL VYGDRTTFSN IVTGERVNAL SITKTAVQNS YGRGNRLTYI VSIKNTGNSA 60 YNGLTLTDDL GRYTLGELAL IPLSYDVGSL LYYVNGTLEE ALDVTAEPAL TANGIDVPAG 120 GNVLVVYTVT ANEYAPLDIE GEITNTVTLS GNGIETVSDN ETVTAITSPE LEITKSLEPV 180 SVVGNGPLTY TFVISNTGSA PVTAETAAVI SDVFDPILNI TEVTLDGEVL TRPDDYTYNE 240 TTGEFATVAG KITIPAAAIA QNPNTGIWSR DPGTVVLKIT GTI 283
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0B5RUJ4-F1-model_v4 | CBM13 | 1 | 283 | 177 | 554 | 0.4394 |
0.6616 |
| A0A829R9Y8 | CBM6 | 3 | 282 | 48 | 634 | 0.4048 |
0.5917 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A829R9Y8 | CBM6 | 3 | 282 | 48 | 634 | 0.4048 |
0.5917 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3fcs-assembly2.cif.gz_C | 27 | 283 | 609 | 899 | 0.3806 |
0.6355 |
| 7nxd-assembly1.cif.gz_A | 26 | 283 | 610 | 903 | 0.3742 |
0.6209 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29577-F1-model_v4 | 1 | 280 | 17 | 227 | 0.544 |
0.6696 |
| AF-Q27977-F1-model_v4 | 26 | 283 | 7 | 344 | 0.4961 |
0.6326 |
| AF-Q9AIS7-F1-model_v4 | 1 | 283 | 232 | 533 | 0.4505 |
0.6067 |
| AF-P0CZ18-F1-model_v4 | 1 | 283 | 232 | 533 | 0.4445 |
0.5986 |
| AF-Q253E5-F1-model_v4 | 1 | 283 | 233 | 534 | 0.4444 |
0.5989 |
| AF-F0T377-F1-model_v4 | 1 | 283 | 232 | 533 | 0.444 |
0.5981 |
| AF-P94664-F1-model_v4 | 2 | 283 | 234 | 534 | 0.4392 |
0.5936 |
| AF-Q9PJV0-F1-model_v4 | 2 | 283 | 223 | 524 | 0.4376 |
0.5883 |
| AF-Q548P6-F1-model_v4 | 2 | 283 | 223 | 523 | 0.4358 |
0.5854 |
| AF-P23603-F1-model_v4 | 2 | 283 | 285 | 523 | 0.4318 |
0.6637 |