PROTEIN: HRGMv2_4434_28_13
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Protein File & Metadata
Source:
HRGMv2_4434_28_13.pdb
Genome ID:
Protein ID:
HRGMv2_4434_28_13
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Protein Sequence
MTRHLSSENR RLTHYQHILR RQPAASLAAL TALSDPEDPA AVVSTHVLAP VLDGLVRWLL 60 REAVRSGRRR LYFLARDGYA PYQAASRYCA QYAIPLDCRY LSCSRYALRI PLFHRDPEQA 120 LDSICRSGPQ VTPDRLCRRA GLTPSQIAAV LPALSLPFGP QDPIPADRMP AIRERLRHCR 180 PFMEGMEARS RAAFPALAGY LRQEGLLDDC PYAIVDSGWV GSIQQTLSEL LAILGADGSL 240 EGYYWGLYDL PAGVRRTGYH PYYFSPTGDL LKKIRFNNSL FEAVYMAPHG MTLGYIREET 300 GRYRPIYGPI DEAHRIFLHQ VGEALTAYQE ALLGQSAAPI WSKDTTAADQ AVAYRLLRAF 360 MMRPTREEAE VFGRLPFSDD VLAGEDRQIA APLSAEDLRD RHPLQQLWML TGLRRPPRRE 420 SAWYAGSVVR RGRAVGYHLG QYTLYQLLRH LRHIYSSQKR QARESP 466
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 16 | 440 | 207 | 631 | 0.6424 |
0.8138 |
| AF-Q0P8I2-F1-model_v4 | 1 | 451 | 66 | 976 | 0.4715 |
0.6719 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 448 | 213 | 1078 | 0.5748 |
0.8405 |
| AF-W0DNV7-F1-model_v4 | GT2 | 1 | 456 | 301 | 1091 | 0.5727 |
0.8219 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 17 | 454 | 631 | 1067 | 0.5664 |
0.839 |
| A0A1I7GMF6 | GT2 | 16 | 451 | 633 | 1083 | 0.5645 |
0.8425 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 8 | 448 | 5 | 403 | 0.5546 |
0.7612 |
| A0A9J7AXY3 | GT2 | 7 | 454 | 3 | 399 | 0.5427 |
0.7837 |
| V4JBH5 | GT2 | 34 | 451 | 1 | 398 | 0.5423 |
0.7925 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 30 | 448 | 4 | 405 | 0.5377 |
0.7896 |
| QRK05458.1 | GT4 | 18 | 462 | 249 | 992 | 0.5289 |
0.7939 |
| AF-U5MZQ8-F1-model_v4 | GT2 | 1 | 446 | 326 | 966 | 0.5288 |
0.7625 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A974WXG9 | GT4 | 1 | 448 | 213 | 1078 | 0.5748 |
0.8405 |
| A0A2I6S8V6 | GT2 | 17 | 454 | 631 | 1067 | 0.5664 |
0.839 |
| A0A1I7GMF6 | GT2 | 16 | 451 | 633 | 1083 | 0.5645 |
0.8425 |
| A0A0U5F758 | GT2 | 8 | 448 | 5 | 403 | 0.5546 |
0.7612 |
| A0A9J7AXY3 | GT2 | 7 | 454 | 3 | 399 | 0.5427 |
0.7837 |
| V4JBH5 | GT2 | 34 | 451 | 1 | 398 | 0.5423 |
0.7925 |
| A0A0H3KC95 | GT2 | 30 | 448 | 4 | 405 | 0.5377 |
0.7896 |
| QRK05458.1 | GT4 | 18 | 462 | 249 | 992 | 0.5289 |
0.7939 |
| U5MZQ8 | GT2 | 1 | 446 | 326 | 966 | 0.5288 |
0.7625 |
| A0A975E9I4 | GT2 | 1 | 440 | 112 | 1004 | 0.5263 |
0.7617 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 20 | 375 | 241 | 591 | 0.5735 |
0.8435 |
| 8a0m-assembly1.cif.gz_B | 1 | 444 | 436 | 876 | 0.5324 |
0.7577 |
| 8a0m-assembly2.cif.gz_C | 1 | 444 | 570 | 1024 | 0.528 |
0.7803 |
| 8a0c-assembly1.cif.gz_A | 1 | 444 | 574 | 1028 | 0.5277 |
0.7806 |
| 8a0m-assembly1.cif.gz_A | 1 | 444 | 569 | 1023 | 0.5276 |
0.7788 |
| 8a0c-assembly1.cif.gz_B | 1 | 444 | 574 | 1025 | 0.52 |
0.7684 |
| 8a0m-assembly2.cif.gz_D | 1 | 444 | 465 | 887 | 0.5037 |
0.7465 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.