PROTEIN: HRGMv2_4434_20_16
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Protein File & Metadata
Source:
HRGMv2_4434_20_16.pdb
Genome ID:
Protein ID:
HRGMv2_4434_20_16
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Protein Sequence
MVYYLLLFMA ALLFGSQFMI VKGYERRSGV SVNAAALFSM ISGLSGFLIF FAANGFRLVF 60 RGVSVWMALL LAAITVASNV LGIQALARGS IAVYSLFMML GGMTLPFLVG VLFLKEPLSA 120 VRILGVVLLA AALALPAVSG RKRDGQPPQL LFYGLCAILF VLNGMSSVIC KLHQIHPDAV 180 ETTGFMVLMY GWLFLLSALL YAVTGRKTRV QVNRQAIVLG MLFSVVNGTA AFCQLISARH 240 VYASAQFPII TGGTMVFSLL LGFWIYRERP GRAQVGQIGL ACIATMLFLF 290
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F951-F1-model_v4 | 4 | 290 | 1 | 282 | 0.8619 |
0.905 |
| AF-Q8DPI5-F1-model_v4 | 1 | 290 | 8 | 296 | 0.861 |
0.892 |
| AF-A0A0H3GYZ7-F1-model_v4 | 1 | 290 | 3 | 276 | 0.8569 |
0.9064 |
| AF-P44170-F1-model_v4 | 4 | 290 | 1 | 285 | 0.8559 |
0.891 |
| AF-Q8ZL13-F1-model_v4 | 1 | 290 | 11 | 285 | 0.8494 |
0.9083 |
| AF-K0F3J5-F1-model_v4 | 1 | 290 | 14 | 290 | 0.8479 |
0.9122 |
| AF-A0A0H3GXI1-F1-model_v4 | 1 | 290 | 5 | 281 | 0.8444 |
0.8941 |
| AF-Q8ZK75-F1-model_v4 | 1 | 290 | 2 | 307 | 0.8411 |
0.9011 |
| AF-K0F565-F1-model_v4 | 1 | 290 | 1 | 287 | 0.8409 |
0.8672 |
| AF-P14182-F1-model_v4 | 1 | 290 | 1 | 286 | 0.8399 |
0.8792 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 290 | 375 | 664 | 0.588 |
0.8354 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 290 | 450 | 767 | 0.5529 |
0.816 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 290 | 819 | 1109 | 0.5321 |
0.8523 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 290 | 97 | 413 | 0.4799 |
0.7444 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 290 | 375 | 664 | 0.588 |
0.8354 |
| A0A3P6AF83 | GH28 | 1 | 290 | 450 | 767 | 0.5529 |
0.816 |
| A0A7H8KSK8 | GT51 | 1 | 290 | 819 | 1109 | 0.5321 |
0.8523 |
| A0A4D6KI88 | GH1 | 1 | 290 | 97 | 413 | 0.4799 |
0.7444 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7paf-assembly1.cif.gz_D | 3 | 289 | 1 | 278 | 0.8599 |
0.8966 |
| 5i20-assembly4.cif.gz_D | 1 | 290 | 3 | 278 | 0.8449 |
0.8932 |
| 5i20-assembly1.cif.gz_A | 1 | 290 | 3 | 280 | 0.8391 |
0.8908 |
| 5i20-assembly3.cif.gz_C | 1 | 290 | 3 | 277 | 0.837 |
0.8897 |
| 5i20-assembly5.cif.gz_E | 1 | 290 | 3 | 282 | 0.8303 |
0.8815 |
| 5i20-assembly2.cif.gz_B | 1 | 290 | 3 | 275 | 0.8275 |
0.8827 |
| 5ogk-assembly1.cif.gz_B | 1 | 290 | 1 | 288 | 0.8037 |
0.8463 |
| 7b0k-assembly1.cif.gz_A | 3 | 290 | 1 | 255 | 0.8017 |
0.875 |
| 5ogk-assembly2.cif.gz_C | 1 | 290 | 2 | 285 | 0.7991 |
0.8478 |
| 6qsk-assembly2.cif.gz_G-2 | 1 | 290 | 2 | 287 | 0.7981 |
0.8445 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44170-F1-model_v4 | 4 | 290 | 1 | 285 | 0.8559 |
0.891 |
| AF-O34416-F1-model_v4 | 1 | 290 | 1 | 285 | 0.8485 |
0.8851 |
| AF-P14182-F1-model_v4 | 1 | 290 | 1 | 286 | 0.8399 |
0.8792 |
| AF-P39314-F1-model_v4 | 1 | 290 | 2 | 307 | 0.839 |
0.8991 |
| AF-Q4UNE6-F1-model_v4 | 1 | 290 | 6 | 283 | 0.8381 |
0.8972 |
| AF-Q08794-F1-model_v4 | 1 | 290 | 7 | 297 | 0.8325 |
0.8828 |
| AF-P71356-F1-model_v4 | 1 | 290 | 2 | 298 | 0.8295 |
0.87 |
| AF-D5RAW5-F1-model_v4 | 1 | 290 | 2 | 297 | 0.8239 |
0.8613 |
| AF-O29740-F1-model_v4 | 1 | 290 | 1 | 285 | 0.8214 |
0.8593 |
| AF-P0ABT8-F1-model_v4 | 1 | 290 | 8 | 290 | 0.818 |
0.8749 |