PROTEIN: HRGMv2_4434_20_15
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Protein File & Metadata
Source:
HRGMv2_4434_20_15.pdb
Genome ID:
Protein ID:
HRGMv2_4434_20_15
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Protein Sequence
MENWLKSCRL TIGTGVPTVF SNQNDIYQDG TTPLFRDEQG VLWALSGHTH VGHIGLFRGT 60 CVTDMQEVCE IHPLFETGAA GRAFDGRPYP EGIQSRGSIW PMGLYICPVT RRFFCFFHNE 120 TGWNGQGTGY IIGGAGDGEP DFRHIGLMYS DDEGHSWRFD RWVLTAADIG FSSLYNPDGI 180 PVRGQSGSSV SLGAGDFSVY VDQREGYLYL YYNILRVDRD SYAWQRCDAF AARTRLRTDG 240 VMGDFVKYYD GSFCEPGNLG RESPVADRAW HPRVVFAREL GFYLMTAGKV HEYQAETTVF 300 LPDTTQVRTS RDLIHWSEPL DLIKDGQPFG NHYAALAPHD GILPASEIDN RPLLLLCHNA 360 TDVIAYPVTI QADL 374
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132Z9M4-F1-model_v4 | 13 | 374 | 5 | 306 | 0.6255 |
0.7289 |
| AF-A0A1C1C8D7-F1-model_v4 | 2 | 371 | 103 | 441 | 0.6163 |
0.7428 |
| AF-Q9I278-F1-model_v4 | 2 | 374 | 27 | 351 | 0.6103 |
0.7969 |
| AF-U7PMW6-F1-model_v4 | 4 | 370 | 28 | 341 | 0.5987 |
0.6957 |
| AF-A0A1C1CKJ4-F1-model_v4 | 4 | 371 | 30 | 342 | 0.5979 |
0.6982 |
| AF-K0F9C6-F1-model_v4 | 1 | 374 | 178 | 513 | 0.5727 |
0.7414 |
| AF-A0A175W8F0-F1-model_v4 | 9 | 374 | 30 | 383 | 0.5474 |
0.6116 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A097ED61-F1-model_v4 | GH0 | 4 | 372 | 1 | 304 | 0.6782 |
0.7662 |
| A0A2Z5YE37 | GH0 | 10 | 371 | 1 | 302 | 0.6763 |
0.7661 |
| AF-A0A402D689-F1-model_v4 | CBM13 | 1 | 374 | 26 | 368 | 0.6722 |
0.8496 |
| AF-H6MVY8-F1-model_v4 | GH183 | 3 | 373 | 21 | 347 | 0.6722 |
0.755 |
| AF-A0A3G8JMK4-F1-model_v4 | GH183 | 1 | 373 | 31 | 357 | 0.6641 |
0.7553 |
| AF-A0A222TQG2-F1-model_v4 | GH183 | 1 | 372 | 28 | 353 | 0.6635 |
0.7533 |
| AF-A0A7D7Z9P7-F1-model_v4 | GH183 | 1 | 372 | 28 | 353 | 0.663 |
0.7528 |
| AF-A0A7D7R243-F1-model_v4 | GH183 | 1 | 373 | 29 | 356 | 0.6629 |
0.7513 |
| AF-A0A6I6U4X3-F1-model_v4 | GH183 | 1 | 373 | 29 | 356 | 0.6616 |
0.7503 |
| AF-A0A6I5ZJW5-F1-model_v4 | GH183 | 1 | 372 | 27 | 353 | 0.661 |
0.7487 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A402D689 | CBM13 | 1 | 374 | 26 | 368 | 0.6722 |
0.8496 |
| A0A1H1EXA3 | GH183 | 1 | 374 | 1 | 331 | 0.6674 |
0.7275 |
| UOY04943.1 | GH117 | 1 | 371 | 21 | 335 | 0.6633 |
0.761 |
| A0A6I6JLI2 | GH117 | 1 | 374 | 37 | 353 | 0.6605 |
0.7705 |
| D0L6J4 | GH183 | 1 | 373 | 30 | 357 | 0.6594 |
0.7488 |
| A0A1D9G4E8 | GH32 | 14 | 374 | 2 | 313 | 0.6588 |
0.7512 |
| W5TH50 | GH183 | 11 | 371 | 2 | 351 | 0.6546 |
0.6983 |
| A0A7W8I0Q7 | GH183 | 1 | 372 | 26 | 370 | 0.6533 |
0.7205 |
| A0A3D9I1N2 | GH137 | 1 | 369 | 1 | 343 | 0.6528 |
0.7037 |
| A0A8J8MPU7 | GH117 | 5 | 374 | 1 | 338 | 0.6527 |
0.7106 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4ak7-assembly1.cif.gz_A | 1 | 374 | 27 | 369 | 0.6407 |
0.7122 |
| 4u6b-assembly1.cif.gz_C | 6 | 373 | 1 | 322 | 0.6346 |
0.7201 |
| 4u6b-assembly1.cif.gz_D | 5 | 373 | 1 | 323 | 0.6342 |
0.719 |
| 5mui-assembly1.cif.gz_A | 1 | 369 | 1 | 338 | 0.6265 |
0.6919 |
| 4n2r-assembly1.cif.gz_A | 4 | 373 | 3 | 305 | 0.6246 |
0.7131 |
| 3taw-assembly1.cif.gz_A | 3 | 372 | 1 | 347 | 0.5959 |
0.643 |
| 3qc2-assembly1.cif.gz_A | 4 | 373 | 6 | 355 | 0.5922 |
0.6421 |
| 5hx0-assembly1.cif.gz_B | 7 | 371 | 1 | 364 | 0.5824 |
0.6184 |
| 5ay9-assembly1.cif.gz_A | 9 | 374 | 28 | 360 | 0.5822 |
0.6784 |
| 2ydp-assembly3.cif.gz_C | 9 | 374 | 2 | 359 | 0.5777 |
0.6111 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B0K2C2-F1-model_v4 | 8 | 374 | 1 | 296 | 0.6174 |
0.7091 |