PROTEIN: HRGMv2_4426_2_81
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Protein File & Metadata
Source:
HRGMv2_4426_2_81.pdb
Genome ID:
Protein ID:
HRGMv2_4426_2_81
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Protein Sequence
MQKFNDKVII RHVTNAVPAG NLAVITGDGF KNARVFANKL GASSDIIKAA LKAGKNIEDM 60 NFASGTDIEL EVIKNSDNHV LTVKTPEGVF SGWQIVVKSD DGESAPFNMN VPEYKWLQNE 120 IITAGGEFRV FGHCFAAPDC FDLSGEEVHG YGKMLTDGHG VSVFLRDSGG GIYDLKVKAA 180 SCYEVRAAVP MTAACGKCTV YIMNDKSGVP VSFETEIYEQ NYLDAVKNCG RVFNVLDYGA 240 AVIRPVSKDY VKKHTFEKTQ DSAPGFQRAL DAAAANGGGT VFVPRGRYHF YGSIHIPRGV 300 KLKGEDPNRV WLELPLGMNP EDGWGTYQEG MKIPVFIKGD GDFEIENINI MSVYSAVVIG 360 APIREGKPKL GDDSYNRVPC YSNLIDDDRD ADNVVIKNCH IYQSPTYIVH RKADPTDQFN 420 VPEYNNSKKF VQPITNYPAL VNVWVAVAIK GRNVKILDNF IEGGGNCLAI LGGQNVVISG 480 NTMVGGDMAG CIDFFSTSYN PDSHWRRKCK NIILENNVFD TASKTSRAAF WIMEEHANYY 540 MANNLIKPFM WHCDSEGFCF HIWSNHMEVP VKKTDGTRLV IDMDKLYEKY GEDCLKGLFE 600 GHEVVKDAFN RGCVYVTGGR GAGIRMPVRE SGGDGVTLEA PLDCELDETS VVCLSDFMKF 660 ENTYVIENEV SALGRGIYYW GGTYSNIIDG NKLHDNGGVL MEDLSGCGPT WNCAGEIFGQ 720 ILNNRVTRAR GFYSNSAMIG LLGGETHDST ISVVVRGNTA EDDCTFTALP RRSHEDGSMS 780 YRGVVFENNV SRNSVCGIEI GDGVSAVVRN HKFENVDTEY DDGGADLTVI D 831
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1L3FJK0 | GH0 | 4 | 818 | 20 | 730 | 0.8173 |
0.8997 |
| A0A108TF15 | GH0 | 1 | 831 | 18 | 773 | 0.8144 |
0.8712 |
| AF-A0A0P0FYU1-F1-model_v4 | GH0 | 1 | 831 | 19 | 773 | 0.812 |
0.8701 |
| K5Z5I0 | PL0 | 1 | 831 | 15 | 805 | 0.7742 |
0.8077 |
| A0A2P7BCM1 | GH0 | 1 | 831 | 13 | 737 | 0.7672 |
0.844 |
| B3DXF3 | GH0 | 4 | 831 | 20 | 862 | 0.7567 |
0.7816 |
| AF-A0A2K8Z979-F1-model_v4 | CBM13 | 5 | 831 | 2 | 746 | 0.6701 |
0.8442 |
| USY21103.1 | GH0 | 156 | 831 | 31 | 510 | 0.5667 |
0.7857 |
| A0A9Y2DYJ4 | GH0 | 63 | 831 | 1 | 661 | 0.4951 |
0.5702 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2K8Z979 | CBM13 | 5 | 831 | 2 | 746 | 0.6701 |
0.8442 |
| A0A173MEZ4 | GH28 | 56 | 831 | 25 | 554 | 0.5568 |
0.7026 |
| A0A2S1YR06 | GH28 | 127 | 830 | 31 | 560 | 0.5541 |
0.7012 |
| UBM57564.1 | CE12 , GH28 | 43 | 831 | 21 | 780 | 0.5039 |
0.5403 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.