PROTEIN: HRGMv2_4423_7_8
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4423_7_8.pdb
Genome ID:
Protein ID:
HRGMv2_4423_7_8
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MRKFILGTDW WTDCDDAVAL RLLCRAVKDQ KVELIGVVIN ACMEKSVSSL DGFLAKEGLS 60 GIPIGIDLTG TDFMGDKHSY QGRLSNYALN YKSNSDAEDG VRLYRKLLAE SEEPIEIVEI 120 GFLQVVSNLL LSPPDDISPL DGMTLVKEKV KKFWVMAGKW DDPVGSEHNF NNNPRSRVGG 180 SIFCEKCPVP VTFLGFEVGV SVITGGTLAK NDHLYDVLCD WGCPEGRSSW DPMTALLAVT 240 GDEKAAGYDT VVGTASVDPL NGTNTFTPNP EGLHKFVIKI KDDNFYKDMI NDIIA 295
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175VWD6-F1-model_v4 | 1 | 295 | 36 | 338 | 0.8251 |
0.9188 |
| AF-Q32K67-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7951 |
0.8242 |
| AF-P22564-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7927 |
0.8221 |
| AF-A0A0H3GJ10-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7924 |
0.8222 |
| AF-O50418-F1-model_v4 | 1 | 295 | 1 | 302 | 0.7884 |
0.823 |
| AF-Q8ZRY7-F1-model_v4 | 1 | 295 | 4 | 303 | 0.7862 |
0.8188 |
| AF-Q2G217-F1-model_v4 | 1 | 295 | 2 | 308 | 0.7809 |
0.8192 |
| AF-A0A0H3GTH3-F1-model_v4 | 1 | 295 | 2 | 308 | 0.7803 |
0.818 |
| AF-P41409-F1-model_v4 | 1 | 295 | 1 | 308 | 0.7793 |
0.8171 |
| AF-Q8ZQY4-F1-model_v4 | 1 | 295 | 2 | 308 | 0.7783 |
0.8164 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7G5J076 | GH28 | 1 | 295 | 23 | 327 | 0.6441 |
0.9156 |
| AF-A0A7G5J076-F1-model_v4 | GH28 | 1 | 295 | 23 | 327 | 0.6441 |
0.9156 |
| AF-Q7UJU4-F1-model_v4 | GH0 | 1 | 295 | 36 | 335 | 0.6351 |
0.911 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7G5J076 | GH28 | 1 | 295 | 23 | 327 | 0.6441 |
0.9156 |
| UNC90733.1 | GH73 | 1 | 295 | 3 | 304 | 0.5283 |
0.7524 |
| UNC91707.1 | GH73 | 1 | 295 | 3 | 304 | 0.5236 |
0.7447 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8db8-assembly1.cif.gz_C | 2 | 295 | 1 | 299 | 0.7957 |
0.8237 |
| 8db6-assembly1.cif.gz_A | 2 | 295 | 1 | 295 | 0.7931 |
0.8146 |
| 8db6-assembly1.cif.gz_C | 2 | 295 | 1 | 291 | 0.793 |
0.8189 |
| 8db8-assembly1.cif.gz_A | 2 | 295 | 1 | 299 | 0.7923 |
0.8217 |
| 8qnd-assembly1.cif.gz_D | 1 | 295 | 2 | 291 | 0.7915 |
0.8226 |
| 8db9-assembly1.cif.gz_C | 2 | 295 | 1 | 301 | 0.7903 |
0.8198 |
| 8qnd-assembly1.cif.gz_A | 1 | 295 | 3 | 294 | 0.7896 |
0.8184 |
| 8qnd-assembly1.cif.gz_B | 1 | 295 | 2 | 293 | 0.7896 |
0.8175 |
| 8qnd-assembly1.cif.gz_C | 1 | 295 | 2 | 294 | 0.7892 |
0.8159 |
| 8db9-assembly1.cif.gz_B | 2 | 295 | 1 | 302 | 0.7858 |
0.8187 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q32K67-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7951 |
0.8242 |
| AF-A6T4G4-F1-model_v4 | 1 | 295 | 2 | 301 | 0.795 |
0.8241 |
| AF-B7NHD4-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7937 |
0.823 |
| AF-B2U249-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7937 |
0.8231 |
| AF-Q1RGH2-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7934 |
0.8228 |
| AF-A7ZHB9-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7933 |
0.8227 |
| AF-A1A778-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7933 |
0.8227 |
| AF-B7LVN6-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7932 |
0.8226 |
| AF-C4ZPV6-F1-model_v4 | 1 | 295 | 2 | 301 | 0.7931 |
0.8225 |
| AF-A7ZVX8-F1-model_v4 | 1 | 295 | 2 | 301 | 0.793 |
0.8224 |