PROTEIN: HRGMv2_4421_6_90
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Protein File & Metadata
Source:
HRGMv2_4421_6_90.pdb
Genome ID:
Protein ID:
HRGMv2_4421_6_90
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Protein Sequence
MNRVNYALMD TTGNRTVLVT TPVPPAQRPT VAAALMGAES TAEQLGFVTA GEAPALTMAG 60 GEFCGNASMA AAALLRPQGG RVLLRVSGTP APVPVEITPA PGGWRGRVAM PLPLRIGVRE 120 LPSLGSVPVV ELPGITHIPL TAPLDRAAAE ALIRPLCRQL AAPALGLLLT DGKSRMTPLV 180 YVPAADTLFW ESSCASGTAA VGAWQQALLG TPVRLTLQQP AGSLTVEADG SCLWLSGTVR 240 KLYETPGI 248
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2FVE4-F1-model_v4 | 1 | 248 | 3 | 271 | 0.8274 |
0.8875 |
| AF-A0A132Z6F5-F1-model_v4 | 4 | 248 | 1 | 265 | 0.7962 |
0.8549 |
| AF-Q51564-F1-model_v4 | 2 | 248 | 1 | 275 | 0.7936 |
0.8571 |
| AF-P0A6K1-F1-model_v4 | 4 | 248 | 1 | 273 | 0.7834 |
0.8505 |
| AF-Q329Y5-F1-model_v4 | 3 | 248 | 1 | 274 | 0.7825 |
0.8482 |
| AF-Q58519-F1-model_v4 | 4 | 248 | 1 | 291 | 0.7777 |
0.8725 |
| AF-A0A0H3GKE3-F1-model_v4 | 4 | 248 | 1 | 273 | 0.7751 |
0.8427 |
| AF-P0A1F2-F1-model_v4 | 4 | 248 | 1 | 273 | 0.7747 |
0.8426 |
| AF-Q32FX9-F1-model_v4 | 3 | 248 | 2 | 294 | 0.7719 |
0.864 |
| AF-Q5F9Q4-F1-model_v4 | 1 | 248 | 1 | 281 | 0.7719 |
0.842 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6jiw-assembly1.cif.gz_A-2 | 1 | 248 | 1 | 261 | 0.8621 |
0.9047 |
| 6jis-assembly1.cif.gz_A-2 | 1 | 248 | 1 | 262 | 0.8601 |
0.9034 |
| 6l4l-assembly1.cif.gz_A | 1 | 248 | 1 | 256 | 0.8495 |
0.8876 |
| 7vdy-assembly1.cif.gz_B | 1 | 248 | 1 | 277 | 0.7935 |
0.8591 |
| 6d13-assembly1.cif.gz_A | 3 | 248 | 1 | 274 | 0.7763 |
0.8423 |
| 5ha4-assembly1.cif.gz_A | 2 | 248 | 1 | 275 | 0.7758 |
0.8448 |
| 1u0k-assembly1.cif.gz_B | 3 | 248 | 1 | 280 | 0.7748 |
0.8519 |
| 2otn-assembly1.cif.gz_A | 1 | 248 | 7 | 289 | 0.7714 |
0.8548 |
| 5h2g-assembly1.cif.gz_B | 1 | 248 | 2 | 276 | 0.7714 |
0.8386 |
| 1gqz-assembly1.cif.gz_A | 4 | 248 | 1 | 273 | 0.766 |
0.8365 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3JU78-F1-model_v4 | 1 | 248 | 3 | 271 | 0.8614 |
0.9185 |
| AF-B9KED6-F1-model_v4 | 4 | 248 | 1 | 247 | 0.8099 |
0.8434 |
| AF-Q9PJW2-F1-model_v4 | 1 | 248 | 7 | 266 | 0.8096 |
0.8612 |
| AF-Q64SY7-F1-model_v4 | 1 | 248 | 2 | 266 | 0.8091 |
0.8637 |
| AF-A8GWH4-F1-model_v4 | 1 | 248 | 2 | 267 | 0.8086 |
0.8603 |
| AF-Q9ZDB7-F1-model_v4 | 1 | 248 | 2 | 267 | 0.8068 |
0.8615 |
| AF-C4K2A3-F1-model_v4 | 1 | 248 | 2 | 267 | 0.8064 |
0.8606 |
| AF-B0BXH3-F1-model_v4 | 1 | 248 | 2 | 267 | 0.8063 |
0.8603 |
| AF-A8GND7-F1-model_v4 | 1 | 248 | 2 | 267 | 0.8063 |
0.8604 |
| AF-Q92I41-F1-model_v4 | 1 | 248 | 2 | 267 | 0.8062 |
0.8602 |