PROTEIN: HRGMv2_4416_50_7
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Protein File & Metadata
Source:
HRGMv2_4416_50_7.pdb
Genome ID:
Protein ID:
HRGMv2_4416_50_7
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Protein Sequence
MDNTELFLDK YKQLEDAAAN QFGEECSSQI ARLERMPQFE NVAAGLRYCR EVRNLLQHNP 60 KIDGQYAVTP GENMLRLLEN VLQRVINPPR ACDAALKIQS IYHRGLDAAV LRTMRDMVKR 120 DLSKIPITQK GRVIGVFSQE TLFSRALSTG LPPLSENTRL HELRDFLTID RKYYRFAPYR 180 APLDEIEAMF DEAYARHVRI RSVFLTENGK PDEALLGLIT PWELIDKL 228
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CMZ4-F1-model_v4 | 1 | 228 | 1 | 229 | 0.73 |
0.7723 |
| AF-Q58332-F1-model_v4 | 36 | 228 | 1 | 137 | 0.5907 |
0.7643 |
| AF-Q2FY09-F1-model_v4 | 12 | 228 | 11 | 176 | 0.5364 |
0.6666 |
| AF-A0A1D6Q1S7-F1-model_v4 | 36 | 228 | 16 | 181 | 0.5062 |
0.6578 |
| AF-P12904-F1-model_v4 | 16 | 228 | 5 | 320 | 0.4386 |
0.5593 |
| AF-A0A0K0DYD2-F1-model_v4 | 7 | 228 | 48 | 311 | 0.3962 |
0.5547 |
| AF-A0A0J9Y2D3-F1-model_v4 | 35 | 228 | 50 | 604 | 0.3505 |
0.601 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0S3RIC5-F1-model_v4 | CBM48 | 18 | 228 | 84 | 481 | 0.4238 |
0.6258 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3lqn-assembly1.cif.gz_A-2 | 81 | 228 | 1 | 136 | 0.6037 |
0.785 |
| 3fv6-assembly1.cif.gz_B | 29 | 228 | 1 | 143 | 0.5747 |
0.7385 |
| 3te5-assembly1.cif.gz_C | 17 | 228 | 1 | 312 | 0.4511 |
0.5705 |
| 3tdh-assembly1.cif.gz_C | 17 | 228 | 1 | 315 | 0.4506 |
0.5713 |
| 2ya3-assembly1.cif.gz_E | 39 | 228 | 2 | 300 | 0.4345 |
0.5961 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58332-F1-model_v4 | 36 | 228 | 1 | 137 | 0.5907 |
0.7643 |
| AF-O34994-F1-model_v4 | 2 | 228 | 37 | 206 | 0.5493 |
0.7192 |
| AF-Q8X9J0-F1-model_v4 | 1 | 228 | 54 | 326 | 0.4603 |
0.557 |
| AF-A6UNL1-F1-model_v4 | 5 | 228 | 54 | 492 | 0.4493 |
0.6327 |
| AF-O84404-F1-model_v4 | 24 | 228 | 41 | 326 | 0.4457 |
0.5915 |
| AF-Q9Z826-F1-model_v4 | 24 | 228 | 45 | 327 | 0.4425 |
0.5863 |
| AF-P12904-F1-model_v4 | 16 | 228 | 5 | 320 | 0.4386 |
0.5593 |