PROTEIN: HRGMv2_4416_14_3
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4416_14_3.pdb
Genome ID:
Protein ID:
HRGMv2_4416_14_3
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKRTLSLLMA LLMLVCLFAG CATDQAKDDG KDNSGQTDGK DPDSKDPDDG GSDVPDEADI 60 VKITWLGTGD GINYKNAVAA EDESLRQQNA IMAKYGFEIE TSWVDQEVYV STVNSMMGAG 120 TLTQSYSTYG RLDDNTIVQW IEAGLFLSCD EIMEYSTGNM IKAFGEDGLY DWGRAKATYT 180 DGDWYYVLIT NDPERGLQLT EEDGPLRVKV QLHGIYGLMV RQDWLDDLGL AMPQTPQEYY 240 DACVSMRTND ANENGMSDER VIIGFGSEYQ YQGIGQWYGL PYLDFFSDPS SGEVEVAMLK 300 KGYADWATYL NQFYNSQLIA SGEGGHPWED GSTFFSQNVV ISWYRQANNV WTTGRSQSGD 360 PDCNFQPLPI IAAVEGEKAR IICQEATSGE FGFSFNADTI TPEDAAKLVD YVYSYEMFLL 420 FYYGVEGKAW EYEEDGVHIL DYTLDPDYRK GDIENQYMPL DAKESGTTWN GWTAYVPNAR 480 MADLWSPYAK TYNSPQEALD AGEPYAEGNS TAELWMTQNE VDYHQPNWVQ LNNLNEWGME 540 NINVAAYYDY ETLPTAEEAA IQSEYANDLK TYLVETATKL VMGEYNVADL QSYIDYAYEN 600 LGLQEYIDVQ QIRVDRFMDA MGL 623
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 11 | 620 | 11 | 502 | 0.6607 |
0.7594 |
| AF-Q8DNU8-F1-model_v4 | 56 | 612 | 35 | 440 | 0.5545 |
0.7108 |
| AF-A0A133CKQ7-F1-model_v4 | 59 | 610 | 37 | 419 | 0.5374 |
0.7041 |
| AF-Q8DNU2-F1-model_v4 | 53 | 612 | 34 | 445 | 0.5369 |
0.682 |
| AF-K0F002-F1-model_v4 | 59 | 609 | 45 | 439 | 0.5356 |
0.6991 |
| AF-K0F2E6-F1-model_v4 | 60 | 616 | 42 | 441 | 0.5342 |
0.6928 |
| AF-Q8DNN7-F1-model_v4 | 18 | 613 | 24 | 437 | 0.5274 |
0.6614 |
| AF-Q8DRJ6-F1-model_v4 | 58 | 623 | 59 | 514 | 0.5185 |
0.6456 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 55 | 623 | 40 | 506 | 0.6252 |
0.7545 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 56 | 612 | 24 | 741 | 0.4223 |
0.5175 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 55 | 623 | 40 | 506 | 0.6252 |
0.7545 |
| A0A9Q8PNJ5 | GH4 | 1 | 610 | 256 | 866 | 0.4386 |
0.5272 |
| A0A7U1BNH7 | GH10 | 56 | 612 | 24 | 741 | 0.4223 |
0.5175 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g5y-assembly1.cif.gz_A | 57 | 622 | 1 | 494 | 0.7419 |
0.8402 |
| 6fth-assembly1.cif.gz_A | 57 | 623 | 1 | 496 | 0.721 |
0.8157 |
| 3omb-assembly1.cif.gz_A | 56 | 623 | 3 | 503 | 0.7184 |
0.8108 |
| 5g62-assembly2.cif.gz_B | 61 | 623 | 1 | 491 | 0.7013 |
0.7986 |
| 5xs8-assembly1.cif.gz_A | 61 | 615 | 1 | 474 | 0.6995 |
0.8068 |
| 3vlw-assembly2.cif.gz_B | 52 | 623 | 1 | 489 | 0.6908 |
0.7882 |
| 4tqu-assembly1.cif.gz_Q | 51 | 623 | 1 | 492 | 0.6907 |
0.7862 |
| 5h6u-assembly1.cif.gz_A | 53 | 623 | 1 | 487 | 0.6891 |
0.7876 |
| 6jhx-assembly2.cif.gz_B | 52 | 619 | 1 | 483 | 0.6813 |
0.7822 |
| 5suo-assembly1.cif.gz_A | 60 | 623 | 1 | 451 | 0.6209 |
0.734 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 53 | 622 | 40 | 538 | 0.7227 |
0.845 |
| AF-P37966-F1-model_v4 | 55 | 619 | 29 | 502 | 0.6655 |
0.7896 |
| AF-Q795R2-F1-model_v4 | 55 | 619 | 35 | 498 | 0.6542 |
0.7887 |
| AF-Q8FVS7-F1-model_v4 | 57 | 609 | 20 | 411 | 0.5695 |
0.7259 |
| AF-Q2YKZ9-F1-model_v4 | 57 | 609 | 20 | 411 | 0.5687 |
0.7252 |
| AF-Q578M8-F1-model_v4 | 57 | 609 | 20 | 411 | 0.5685 |
0.7249 |
| AF-Q7LYW7-F1-model_v4 | 50 | 612 | 35 | 450 | 0.5427 |
0.6868 |
| AF-O07009-F1-model_v4 | 58 | 613 | 33 | 421 | 0.5334 |
0.6925 |