PROTEIN: HRGMv2_4409_6_34
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Protein File & Metadata
Source:
HRGMv2_4409_6_34.pdb
Genome ID:
Protein ID:
HRGMv2_4409_6_34
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Detailed structural information will appear here after analysis...
Protein Sequence
MKKKSKMQDR MTRVVTLCTL AVFLIILVLF TGRILSRCFS YELNHAYTAD APLYWTVGRG 60 ILNGIKPYSG LYENKPVGVF LISALSLGLT DGTILCNVCS LLCMLIIGLL PAVSTLELCL 120 KKKLPVEKIL LYTGFAWLLG MFLMLYCEMR SGGFQVENMG AAFIGLYFWA IMHIHWEKGD 180 SRSSPSYRKK CVRPLIWTLL AAFFAMCGVM MKEPFALMAV AGSLLLLDSP RDFLSRTVVP 240 MCTGGVMALV LLLCCGVLPE YFRIYLANMF GNHLSVYGSP FSRMLQFDKI TANISAFSKP 300 LLWIILLSVL LILHAGVFCA REISIRRRLW RGLAMGIALF SASFCVGLGG QYYNHHYIFA 360 APLYILVILL ACRILVDTTA EKRFRPQAVA VAGLLLLIFL KPQTDIAFAG DYSDKYASIV 420 SQANYVDALL DYYGEDTYQF LGFNGENKFY GLTKHSPKGP AFAQDQYNFT EEDSWFSQQL 480 LNQLDEVNIV ILDRLNMPAI NERVQKILDT QFTTEPEDPY TGMEKPASFR YRIYYRIN 538
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CZ87-F1-model_v4 | 6 | 537 | 21 | 518 | 0.6603 |
0.7189 |
| AF-Q8ZP99-F1-model_v4 | 14 | 538 | 12 | 509 | 0.5975 |
0.6554 |
| AF-Q9NX78-F1-model_v4 | 25 | 532 | 28 | 595 | 0.5628 |
0.6829 |
| AF-A0A1C1CDU5-F1-model_v4 | 1 | 538 | 26 | 699 | 0.532 |
0.6399 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-K4R0C6-F1-model_v4 | GT83 | 25 | 538 | 24 | 476 | 0.6882 |
0.7797 |
| AF-A0A1B1PXR7-F1-model_v4 | GT89 | 8 | 538 | 1 | 521 | 0.6854 |
0.721 |
| A0A1L9GN74 | GT83 | 17 | 538 | 1 | 491 | 0.6688 |
0.7246 |
| A0A974TIM4 | GT83 | 1 | 538 | 1 | 506 | 0.6662 |
0.7081 |
| AF-A9GFC3-F1-model_v4 | GT89 | 9 | 538 | 19 | 536 | 0.6641 |
0.7111 |
| AF-A0A2Z3H848-F1-model_v4 | GT83 | 35 | 538 | 1 | 490 | 0.6602 |
0.7101 |
| AF-A0A6C2YNQ2-F1-model_v4 | GT83 | 21 | 538 | 25 | 503 | 0.659 |
0.7324 |
| AF-A0A2S0MJC5-F1-model_v4 | GT83 | 17 | 538 | 7 | 501 | 0.6585 |
0.7117 |
| A0A975CGT2 | GT83 | 10 | 538 | 5 | 503 | 0.6576 |
0.7079 |
| AF-A0A4Y6PWL0-F1-model_v4 | CBM38 | 1 | 538 | 2 | 556 | 0.6558 |
0.7568 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K4R0C6 | GT83 | 25 | 538 | 24 | 476 | 0.6882 |
0.7797 |
| A0A1B1PXR7 | GT89 | 8 | 538 | 1 | 521 | 0.6854 |
0.721 |
| UCV14583.1 | GT83 | 11 | 538 | 1 | 487 | 0.673 |
0.7293 |
| B7J3X5 | GT83 | 16 | 538 | 1 | 454 | 0.6713 |
0.7524 |
| A0A1L9GN74 | GT83 | 17 | 538 | 1 | 491 | 0.6688 |
0.7246 |
| A0A974TIM4 | GT83 | 1 | 538 | 1 | 506 | 0.6662 |
0.7081 |
| A0A6C2YNQ2 | GT83 | 21 | 538 | 25 | 503 | 0.659 |
0.7324 |
| A0A4R7FJY4 | GT83 | 4 | 538 | 1 | 514 | 0.6585 |
0.696 |
| A0A975CGT2 | GT83 | 10 | 538 | 5 | 503 | 0.6576 |
0.7079 |
| A0A518AYL4 | GT83 | 13 | 538 | 1 | 484 | 0.6573 |
0.7182 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MJ97-F1-model_v4 | 21 | 538 | 8 | 494 | 0.6467 |
0.7034 |
| AF-Q1MJ94-F1-model_v4 | 18 | 538 | 1 | 497 | 0.643 |
0.6895 |
| AF-Q1MJ96-F1-model_v4 | 18 | 538 | 1 | 499 | 0.6425 |
0.6875 |
| AF-Q4IB63-F1-model_v4 | 13 | 534 | 8 | 603 | 0.568 |
0.6377 |
| AF-Q9NX78-F1-model_v4 | 25 | 532 | 28 | 595 | 0.5628 |
0.6829 |
| AF-Q2UH15-F1-model_v4 | 1 | 533 | 38 | 629 | 0.541 |
0.6393 |
| AF-Q4WPG0-F1-model_v4 | 9 | 533 | 31 | 647 | 0.5353 |
0.6527 |