PROTEIN: HRGMv2_4384_26_8
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4384_26_8.pdb
Genome ID:
Protein ID:
HRGMv2_4384_26_8
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MDLKQYVKEM EQRRGNLISV LRDSPPDKDE YGDYVAQQIC FFEELREAAN QRLLKLTQWF 60 ELRKTRNPQC EVDFIAFNLI KAVYLCGINL QEEVLAGIDR LFLERNFESI YKSENHMLLF 120 RAARMLYAQR NPEALLTAYR KNGAQLYEED SLYIKEFLLF RAKRGWAEFD AYGYAKVIVD 180 CLIALRDFCR DETLSHLAED CLNLLLLDML ADCSGPFYGG AHGRVYEYQI FDQSKCGMFW 240 VYYLYFGHEY TDEIDNAGIY DLLSSDFRPA DYVYEAWSSK PAVYENFESK HLHSISSDLP 300 HRQLPQVSGS INKYTYVTPE YVLGAVNLQD SYPEGNNAGW YAHHEQHEWD LMLTDAPNVR 360 IFTHHPGHSG TEGKEHGRWT GDLGCGCGRF FCNRGRLLAL YDIPEGEEKR IHAYVPCRLF 420 EQRRDGKYLF LHRGRVFISL WFSNGYQDAD GVDGESEINS YGTRHCVVCE VATADEYDCF 480 ETFIEGVQVK KIDFDCERMS VAYQDLYMEG NEREIDGQKV QFPYPTYQCP FLYEEFNSGV 540 VTVNGKTKVD FRQF 554
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517ZPE3-F1-model_v4 | CBM67 | 1 | 554 | 47 | 813 | 0.7194 |
0.8682 |
| AF-A0A517ST81-F1-model_v4 | CE12 | 1 | 553 | 49 | 864 | 0.6848 |
0.8417 |
| AF-A0A1H1NK57-F1-model_v4 | PL0 | 4 | 517 | 19 | 638 | 0.5888 |
0.6958 |
| AF-A0A0X8JSH9-F1-model_v4 | PL0 | 14 | 479 | 1 | 494 | 0.5716 |
0.654 |
| WGA86642.1 | PL12 | 14 | 480 | 49 | 547 | 0.5657 |
0.6724 |
| QKE22511.1 | PL0 | 14 | 473 | 50 | 551 | 0.5627 |
0.6819 |
| AF-A0A7M1W6T1-F1-model_v4 | PL0 | 14 | 480 | 47 | 541 | 0.5625 |
0.667 |
| AF-A0A127F915-F1-model_v4 | PL0 | 14 | 479 | 52 | 551 | 0.5605 |
0.6716 |
| QWE27028.1 | PL0 | 14 | 474 | 53 | 550 | 0.5597 |
0.6761 |
| AQM68232.1 | PL0 | 14 | 479 | 58 | 552 | 0.5546 |
0.6651 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517ZPE3 | CBM67 | 1 | 554 | 47 | 813 | 0.7194 |
0.8682 |
| A0A517ST81 | CE12 | 1 | 553 | 49 | 864 | 0.6848 |
0.8417 |
| A0A2Z4UE33 | PL33_2 | 1 | 480 | 1 | 574 | 0.5796 |
0.6893 |
| AJY72002.1 | PL12 | 26 | 518 | 11 | 508 | 0.5786 |
0.6379 |
| A0A7G9NY38 | PL35 | 3 | 518 | 51 | 608 | 0.5764 |
0.6595 |
| A0A1H2FW11 | PL35 | 4 | 518 | 39 | 636 | 0.5755 |
0.6718 |
| UJQ94240.1 | GH154 | 19 | 536 | 1 | 582 | 0.5744 |
0.6444 |
| A0A9E8NRC3 | PL35 | 4 | 505 | 44 | 571 | 0.5723 |
0.6553 |
| A0A2H4SBR7 | PL35 | 3 | 537 | 46 | 628 | 0.5713 |
0.6468 |
| A0A6F8SLX9 | PL12 | 11 | 479 | 21 | 588 | 0.5678 |
0.6948 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1rw9-assembly1.cif.gz_A | 7 | 524 | 23 | 700 | 0.5506 |
0.6839 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.