PROTEIN: HRGMv2_4365_34_12
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Protein File & Metadata
Source:
HRGMv2_4365_34_12.pdb
Genome ID:
Protein ID:
HRGMv2_4365_34_12
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Protein Sequence
MDLSLVIRSG RDERVLDCIG SVDEDVDIVV STVPDPDFCD LVESTGARAV TSPPGNLSVV 60 SNVGIDAARH DLVFLTDSDT LLCSGCLEAV HSGLQRAPFV NARIEFAHDG TRASRLVSEA 120 RDFVNSKDLA FTPGLGLDRQ AAGLVGGYFF DEEVPFAVDA NLDYRIRRNG VPVVHDSGAR 180 IVHGIETVEH DMVAARRIGA GVRAGARSLA RMYPDTSERR IGHDLKAVHT GDYPDILRTK 240 GMGVLLYQMR WDLNFHIGRC RG 262
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I1N6-F1-model_v4 | 1 | 262 | 1 | 285 | 0.7397 |
0.814 |
| AF-P26403-F1-model_v4 | 1 | 262 | 1 | 285 | 0.7213 |
0.8064 |
| AF-O24928-F1-model_v4 | 1 | 241 | 2 | 251 | 0.699 |
0.7791 |
| AF-P9WMY1-F1-model_v4 | 1 | 222 | 3 | 218 | 0.691 |
0.7816 |
| AF-K0F3W2-F1-model_v4 | 3 | 222 | 1 | 213 | 0.6881 |
0.7804 |
| AF-Q57022-F1-model_v4 | 1 | 247 | 3 | 250 | 0.6839 |
0.7356 |
| AF-K0F8C8-F1-model_v4 | 1 | 262 | 8 | 284 | 0.6792 |
0.729 |
| AF-Q0P9A9-F1-model_v4 | 1 | 260 | 2 | 270 | 0.6785 |
0.7245 |
| AF-H9L470-F1-model_v4 | 1 | 251 | 1 | 244 | 0.6767 |
0.7357 |
| AF-Q48215-F1-model_v4 | 1 | 252 | 1 | 265 | 0.6746 |
0.7292 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D1YX51-F1-model_v4 | GT2 | 1 | 262 | 1 | 261 | 0.9511 |
0.9717 |
| QQF64474.1 | GT2 | 1 | 262 | 1 | 259 | 0.9001 |
0.9259 |
| AF-A0A1C3SEX6-F1-model_v4 | GT2 | 1 | 262 | 2 | 257 | 0.8665 |
0.9219 |
| AF-Q8ZZ45-F1-model_v4 | GT2 | 1 | 262 | 3 | 272 | 0.8107 |
0.8508 |
| A0A8F4J855 | GT0 | 1 | 262 | 8 | 268 | 0.8002 |
0.8963 |
| AF-A0A4P8SWV6-F1-model_v4 | GT2 | 1 | 262 | 39 | 305 | 0.7988 |
0.9043 |
| AF-A0A097QSV0-F1-model_v4 | GT2 | 1 | 262 | 6 | 271 | 0.7981 |
0.8363 |
| AF-A0A1T4YN38-F1-model_v4 | GT2 | 1 | 262 | 3 | 265 | 0.7963 |
0.8309 |
| AF-A0A2U7PC49-F1-model_v4 | GT2 | 1 | 262 | 4 | 275 | 0.7961 |
0.8436 |
| AF-A0A0U2ZBH2-F1-model_v4 | GT2 | 1 | 262 | 6 | 271 | 0.7956 |
0.8342 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D1YX51 | GT2 | 1 | 262 | 1 | 261 | 0.9511 |
0.9717 |
| QQF64474.1 | GT2 | 1 | 262 | 1 | 259 | 0.9001 |
0.9259 |
| A0A1C3SEX6 | GT2 | 1 | 262 | 2 | 257 | 0.8665 |
0.9219 |
| QNJ15996.1 | GT2 | 1 | 262 | 1 | 267 | 0.8162 |
0.8606 |
| Q8ZZ45 | GT2 | 1 | 262 | 3 | 272 | 0.8107 |
0.8508 |
| A0A0C6EU14 | GT2 | 1 | 262 | 5 | 265 | 0.8061 |
0.8613 |
| A0A6M4IKZ6 | GT2 | 1 | 262 | 4 | 292 | 0.8005 |
0.8652 |
| A0A4P8SWV6 | GT2 | 1 | 262 | 39 | 305 | 0.7988 |
0.9043 |
| BCM88483.1 | GT2 | 1 | 262 | 7 | 295 | 0.7981 |
0.8777 |
| QWD60443.1 | GT2 | 1 | 262 | 1 | 273 | 0.7978 |
0.8487 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6p61-assembly2.cif.gz_B | 1 | 186 | 3 | 191 | 0.6719 |
0.8142 |
| 1h7q-assembly1.cif.gz_A | 1 | 226 | 1 | 234 | 0.6369 |
0.7265 |
| 5hea-assembly1.cif.gz_A | 1 | 262 | 1 | 262 | 0.6277 |
0.6696 |
| 6h4m-assembly4.cif.gz_Q | 1 | 262 | 2 | 272 | 0.6237 |
0.7001 |
| 6h4m-assembly2.cif.gz_I | 1 | 262 | 2 | 273 | 0.622 |
0.6991 |
| 6h4m-assembly1.cif.gz_B | 1 | 262 | 2 | 275 | 0.6214 |
0.7005 |
| 6h4m-assembly2.cif.gz_H | 1 | 262 | 2 | 276 | 0.6213 |
0.7015 |
| 6hnq-assembly4.cif.gz_E | 1 | 262 | 3 | 275 | 0.62 |
0.6992 |
| 6hnq-assembly2.cif.gz_O | 1 | 262 | 2 | 274 | 0.6198 |
0.6978 |
| 6hnq-assembly2.cif.gz_H | 1 | 262 | 3 | 276 | 0.6195 |
0.6994 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4GYH2-F1-model_v4 | 1 | 262 | 6 | 285 | 0.7935 |
0.8593 |
| AF-D4GYG7-F1-model_v4 | 1 | 262 | 5 | 297 | 0.7655 |
0.8411 |
| AF-D4GYH3-F1-model_v4 | 1 | 262 | 1 | 304 | 0.7347 |
0.8214 |
| AF-P33691-F1-model_v4 | 1 | 262 | 7 | 324 | 0.7124 |
0.8123 |
| AF-B3VA59-F1-model_v4 | 1 | 262 | 2 | 318 | 0.7119 |
0.804 |
| AF-P33695-F1-model_v4 | 1 | 262 | 6 | 297 | 0.7063 |
0.7854 |
| AF-Q077R2-F1-model_v4 | 1 | 241 | 1 | 246 | 0.7007 |
0.7706 |
| AF-B5L3F2-F1-model_v4 | 1 | 244 | 4 | 251 | 0.7005 |
0.7649 |
| AF-O32268-F1-model_v4 | 1 | 245 | 5 | 252 | 0.6933 |
0.7518 |
| AF-D4GU63-F1-model_v4 | 1 | 262 | 17 | 300 | 0.6921 |
0.767 |