PROTEIN: HRGMv2_4358_5_87
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Protein File & Metadata
Source:
HRGMv2_4358_5_87.pdb
Genome ID:
Protein ID:
HRGMv2_4358_5_87
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Protein Sequence
MAEFVPEIMT ELRKDIVRVP EVISQASGIK VFGKKIRSII FTTDIAIIRN TNANAVIAVY 60 PFTPHPAITK SIIEAADIPV FSGVGGGLTQ GARSAYMSMF AEAQGSLGVV LNGPTPLETV 120 REVCRIVDIP VVSTVTSKYT ELDEKLEAGI SIINISAGKE TAETVRYFRE KYPELPIIAT 180 GGPTEESILE TIEAGANAIT YTPPTNGELF SAKMDKYRQL EKENHQN 227
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CSS6-F1-model_v4 | 1 | 226 | 2 | 227 | 0.9915 |
1.001 |
| AF-A0A077ZBS2-F1-model_v4 | 1 | 227 | 401 | 627 | 0.6754 |
0.9967 |
| AF-A0A1C1CKW7-F1-model_v4 | 29 | 221 | 13 | 264 | 0.634 |
0.8158 |
| AF-Q9I5E2-F1-model_v4 | 29 | 221 | 10 | 267 | 0.6156 |
0.8286 |
| AF-A0A0D2DIS9-F1-model_v4 | 30 | 225 | 12 | 272 | 0.6031 |
0.8123 |
| AF-A0A0D2E3F1-F1-model_v4 | 2 | 213 | 1 | 300 | 0.5568 |
0.7226 |
| AF-I1KZI4-F1-model_v4 | 30 | 227 | 48 | 466 | 0.5413 |
0.8335 |
| AF-Q8GYI4-F1-model_v4 | 30 | 227 | 75 | 456 | 0.5382 |
0.8371 |
| AF-C0P4Z5-F1-model_v4 | 30 | 227 | 72 | 433 | 0.5321 |
0.8333 |
| AF-Q7F8Y3-F1-model_v4 | 30 | 227 | 84 | 446 | 0.5307 |
0.838 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4mg4-assembly4.cif.gz_D | 30 | 218 | 3 | 246 | 0.6621 |
0.8393 |
| 4mg4-assembly1.cif.gz_H | 30 | 218 | 2 | 243 | 0.6612 |
0.8343 |
| 4mg4-assembly2.cif.gz_F | 30 | 218 | 4 | 250 | 0.6595 |
0.8417 |
| 4mg4-assembly1.cif.gz_A | 30 | 218 | 5 | 250 | 0.657 |
0.839 |
| 1ujq-assembly1.cif.gz_D | 29 | 221 | 5 | 251 | 0.6388 |
0.8244 |
| 1s2v-assembly1.cif.gz_A | 29 | 224 | 5 | 256 | 0.6298 |
0.8158 |
| 2dua-assembly1.cif.gz_A | 29 | 224 | 5 | 257 | 0.6297 |
0.8189 |
| 1s2u-assembly1.cif.gz_A | 28 | 221 | 8 | 263 | 0.6286 |
0.8306 |
| 1xg3-assembly1.cif.gz_D | 29 | 221 | 6 | 263 | 0.628 |
0.8269 |
| 4lsb-assembly1.cif.gz_B | 29 | 222 | 9 | 258 | 0.6265 |
0.8152 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P20167-F1-model_v4 | 25 | 212 | 1 | 198 | 0.6322 |
0.7614 |
| AF-Q84G06-F1-model_v4 | 30 | 224 | 6 | 264 | 0.6265 |
0.8266 |
| AF-A4IN28-F1-model_v4 | 28 | 210 | 6 | 204 | 0.6178 |
0.7702 |
| AF-Q9KSC2-F1-model_v4 | 29 | 221 | 17 | 279 | 0.6165 |
0.8407 |
| AF-Q9Z9T7-F1-model_v4 | 29 | 221 | 16 | 269 | 0.6159 |
0.8308 |
| AF-P54528-F1-model_v4 | 30 | 221 | 14 | 269 | 0.615 |
0.8349 |
| AF-Q8NSL2-F1-model_v4 | 29 | 221 | 16 | 271 | 0.6039 |
0.8222 |
| AF-Q3KCJ2-F1-model_v4 | 29 | 218 | 11 | 251 | 0.6003 |
0.8094 |
| AF-Q5XGL6-F1-model_v4 | 30 | 213 | 28 | 293 | 0.5681 |
0.8268 |
| AF-Q56062-F1-model_v4 | 16 | 187 | 27 | 243 | 0.5091 |
0.7547 |