dbCAN Logo

PROTEIN: HRGMv2_4358_3_31

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_4358_3_31.pdb
Genome ID:
HRGMv2_4358
Protein ID:
HRGMv2_4358_3_31

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MFGVSKKKVV   GMLALTSTVL   LALGACGSGK   EEASADKTVE   LPSIEDRYTP   EKDTPAWKLD 60
KKEEATKLTW   YVNADWWNTE   FGKDMVTKKV   KEDLNIDIKF   ITGDDTKLNT   YFAGGDMPDI 120
VTVFDSNSQV   ARKANSWALP   LQDLAEKYDP   YFNQVARQET   LNWYKLSDGK   SYGYPDYSNV 180
QADFDSGDIF   ARDAFIIRKD   VYEAIGKPDF   TTPDGFVAGM   KKIKEQFPEL   IPFGFNDFAK 240
DGSSNGSMDS   VVQDMLGVPY   TDGDDYYDRN   LDEDYIKWVK   AFRQVHEDGN   ISDDTFTDDG 300
DKFKEKLQTG   KYGAVMIGSF   VNQGIPLQTF   KAANPDSEYI   AVDGIQSTKG   NDPTLTQAGI 360
SGWMINYIGK   NCQDPAKAIQ   LFTYLLSDEG   EMLTNFGIEG   ETYTKDGDKV   QWTDEARKIQ 420
QEDPEKWQLE   YRMGEFIQFG   HDRFKAMNDD   SYVDAVKQMQ   QWGEGKLTSQ   FLTENIGPDA 480
GSQEARALSA   IQTNWSTTLV   GMLRAKDEKE   LDDLLAKYKT   FQEENKIDDV   NKVRNEKIQE 540
NKEKLAM 547
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 42 543 28 502 0.7039 0.7909
AF-A0A133D019-F1-model_v4 10 544 8 485 0.6554 0.722
AF-K0EWS9-F1-model_v4 28 533 32 463 0.6203 0.7325
AF-A0A0H3GHK7-F1-model_v4 61 537 18 431 0.6093 0.7271
AF-K0F002-F1-model_v4 39 533 41 439 0.6041 0.7454
AF-P76042-F1-model_v4 45 533 22 430 0.6024 0.7212
AF-Q8DNU8-F1-model_v4 46 534 34 440 0.5975 0.727
AF-Q8DRJ6-F1-model_v4 10 547 28 514 0.5934 0.6639
AF-A0A133CSA1-F1-model_v4 47 527 22 427 0.5891 0.7081
AF-K0F1Y0-F1-model_v4 34 533 41 433 0.5878 0.7305
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 39 543 35 506 0.713 0.8071
AF-A0A7U1BNH7-F1-model_v4 GH10 62 539 26 744 0.482 0.6342
A0A9Q8PNJ5 GH4 1 533 260 866 0.4773 0.6039
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 39 543 35 506 0.713 0.8071
A0A7U1BNH7 GH10 62 539 26 744 0.482 0.6342
A0A9Q8PNJ5 GH4 1 533 260 866 0.4773 0.6039
UJP10085.1 GH154 8 505 153 1168 0.3609 0.5639
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5xs8-assembly1.cif.gz_A 65 538 1 474 0.7648 0.8351
6fth-assembly1.cif.gz_A 62 547 1 496 0.7499 0.8181
3omb-assembly1.cif.gz_A 42 543 1 503 0.7463 0.7958
6jhx-assembly2.cif.gz_B 56 543 1 483 0.7411 0.8049
5h6u-assembly1.cif.gz_A 57 547 1 487 0.7401 0.8005
3vlw-assembly2.cif.gz_B 57 547 1 489 0.7399 0.799
4tqu-assembly1.cif.gz_Q 57 547 2 492 0.7399 0.7981
5g62-assembly2.cif.gz_B 66 547 1 491 0.7355 0.805
5g5y-assembly1.cif.gz_A 61 546 1 494 0.7168 0.783
5suo-assembly1.cif.gz_A 64 547 1 451 0.6792 0.7615
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 44 542 28 502 0.7195 0.8069
AF-A0A0H2URD6-F1-model_v4 41 546 31 538 0.7194 0.7877
AF-Q795R2-F1-model_v4 42 543 30 498 0.6856 0.777
AF-Q8FVS7-F1-model_v4 62 533 21 411 0.6466 0.7865
AF-Q2YKZ9-F1-model_v4 62 533 21 411 0.6459 0.7856
AF-Q578M8-F1-model_v4 62 533 22 411 0.6456 0.7866
AF-O50499-F1-model_v4 3 542 1 469 0.6229 0.6914
AF-A0QXD9-F1-model_v4 13 533 36 477 0.6211 0.7289
AF-Q55471-F1-model_v4 40 533 24 421 0.6077 0.7376
AF-O58758-F1-model_v4 61 533 41 420 0.6047 0.7621
Download Full SwissProt Results