PROTEIN: HRGMv2_4358_13_61
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Protein File & Metadata
Source:
HRGMv2_4358_13_61.pdb
Genome ID:
Protein ID:
HRGMv2_4358_13_61
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Protein Sequence
MTKLTIAIQN KAGELRTAAR GEERKEMPLT DSAENLVHLA MRNFKYQEGD QIVVQADQPE 60 TYLMVKLDET LATSLIYLSG NSWSYPISFL PNVLAARPKE RFAGESHYLS ARVATAEEIT 120 MYQNLALNPH DQKVFTGSYP HAEANVETRN DATFFACNAI DGIYANHSHG SYPFQSWGIN 180 QQQDAALTIL FGREVELDKV VFTWRADFPH DSYWTQVSLC FSDGTKEVFQ TTKTARPQTF 240 EFNQRRVTTV TFEELIQADD DSPFPALTQI ECFGRNVNIE EN 282
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8IKW0-F1-model_v4 | 12 | 282 | 173 | 692 | 0.324 |
0.5089 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 280 | 34 | 372 | 0.5543 |
0.888 |
| A0A2G4YLU0 | CBM47 | 120 | 281 | 23 | 170 | 0.5477 |
0.8458 |
| AF-A0A346DVI5-F1-model_v4 | CBM47 | 6 | 282 | 7 | 438 | 0.4556 |
0.5826 |
| A0A9E9K109 | CBM32 | 8 | 282 | 1 | 559 | 0.449 |
0.6195 |
| AF-A0A7H8JXZ3-F1-model_v4 | GH20 | 1 | 276 | 37 | 658 | 0.3901 |
0.5608 |
| AF-A0A7G9NY75-F1-model_v4 | CBM32 , GH29 | 3 | 276 | 26 | 590 | 0.3723 |
0.5205 |
| AF-A0A4P6YHP5-F1-model_v4 | GH128 | 9 | 282 | 170 | 697 | 0.3684 |
0.5575 |
| AF-A0A4P6YB92-F1-model_v4 | GH128 | 3 | 282 | 173 | 713 | 0.3651 |
0.5443 |
| AF-A0A3S8Y3P7-F1-model_v4 | CBM13 , CBM32 , GH31 | 17 | 282 | 66 | 1045 | 0.3619 |
0.6078 |
| AF-A0A402D005-F1-model_v4 | GH29 | 64 | 276 | 306 | 573 | 0.3448 |
0.5958 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 280 | 34 | 372 | 0.5543 |
0.888 |
| A0A2G4YLU0 | CBM47 | 120 | 281 | 23 | 170 | 0.5477 |
0.8458 |
| A0A2U8E2H1 | CBM32 | 7 | 277 | 24 | 358 | 0.4835 |
0.5754 |
| UVH36227.1 | CBM47 | 3 | 279 | 194 | 489 | 0.4528 |
0.6132 |
| A0A9E9K109 | CBM32 | 8 | 282 | 1 | 559 | 0.449 |
0.6195 |
| A0A172TNE5 | CBM32 , GH5 | 7 | 282 | 43 | 526 | 0.4023 |
0.574 |
| A0A0A7RPN1 | CBM47 | 30 | 282 | 20 | 387 | 0.3793 |
0.5695 |
| A0A7G9NY75 | CBM32 , GH29 | 3 | 276 | 26 | 590 | 0.3723 |
0.5205 |
| A0A4P6YB92 | GH128 | 3 | 282 | 173 | 713 | 0.3651 |
0.5443 |
| A0A9Q9IC68 | CBM13 | 6 | 282 | 381 | 875 | 0.3607 |
0.5719 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3cqo-assembly1.cif.gz_C | 120 | 282 | 1 | 157 | 0.4434 |
0.7967 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.