PROTEIN: HRGMv2_4334_17_12
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Protein File & Metadata
Source:
HRGMv2_4334_17_12.pdb
Genome ID:
Protein ID:
HRGMv2_4334_17_12
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Protein Sequence
MKTTISQSPG LPVKYIVTLL TTFTATFLAA ATGGFPVAWL VAVVAGWSLN QLRQQRELIL 60 LAIVVLLVFQ NFLIGVGAHL AGNDQGLTFL TQVPLLFTVG LFVGGPLKTI RWDWVTRLFL 120 GLLGISLGSL AFGHGSLGAI IANLRNLTFF FMVYQIAWQN SRLASFDVAA LCRRLSHLAF 180 LIIGVGVVLL LGGYRAYAVI GIDEVYHAKG ATALAQAGLD GRFYSDAFGH AVTRMGSLYY 240 EPVNLGYLLV GMLLFLVMFR WTQSWVVRVL SEAIVLVGVF LTFGKGALMV LGLALLAPGI 300 HRSLKWCLHF LNDRAIYLGV MLLVAGLVYL YSNFYYQTFG GAVGNHFTAI TETWRNILAR 360 PLGHGLGTGG NAAAALNVGE SDDATWLSTG GETALLSFGY QIGLVGIGIL SLIFVQLGRQ 420 HLVRLNSLTR RAQASCLQLA YLPVILIIMS IFQDNTFTPQ CIAIYMMLLA MGPVLRRPAG 480 EESP 484
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 47 | 478 | 14 | 390 | 0.6138 |
0.7253 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 17 | 478 | 5 | 444 | 0.5262 |
0.7028 |
| AF-B5YD26-F1-model_v4 | GT9 | 48 | 484 | 37 | 562 | 0.5148 |
0.703 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 48 | 478 | 16 | 416 | 0.5143 |
0.7863 |
| AF-B8DZR6-F1-model_v4 | GT9 | 48 | 484 | 37 | 562 | 0.5139 |
0.7018 |
| AF-I0HYS1-F1-model_v4 | GH39 | 7 | 477 | 415 | 852 | 0.5136 |
0.7196 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 48 | 478 | 16 | 416 | 0.5133 |
0.7848 |
| AF-M4X4V7-F1-model_v4 | GH39 | 47 | 478 | 17 | 418 | 0.5108 |
0.7792 |
| A0A9Q9IL13 | GT4 | 48 | 478 | 14 | 500 | 0.5074 |
0.7466 |
| AF-E6U9X7-F1-model_v4 | GT0 | 48 | 478 | 4 | 422 | 0.5026 |
0.7163 |
| AF-B8IGI7-F1-model_v4 | GH16_7 | 25 | 477 | 2 | 456 | 0.502 |
0.6806 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A517MXC4 | GT26 | 17 | 478 | 5 | 444 | 0.5262 |
0.7028 |
| B5YD26 | GT9 | 48 | 484 | 37 | 562 | 0.5148 |
0.703 |
| I0HYS1 | GH39 | 7 | 477 | 415 | 852 | 0.5136 |
0.7196 |
| M4X4V7 | GH39 | 47 | 478 | 17 | 418 | 0.5108 |
0.7792 |
| A0A9Q9IL13 | GT4 | 48 | 478 | 14 | 500 | 0.5074 |
0.7466 |
| B8IGI7 | GH16_7 | 25 | 477 | 2 | 456 | 0.502 |
0.6806 |
| H8L3P3 | GT2 | 1 | 483 | 1 | 714 | 0.4999 |
0.6142 |
| D5MJ04 | GT9 | 48 | 479 | 21 | 417 | 0.4933 |
0.7318 |
| A0A7S8IC57 | GH39 | 6 | 477 | 554 | 1038 | 0.4918 |
0.6907 |
| A0A160T1R3 | GH39 | 6 | 482 | 586 | 1044 | 0.49 |
0.705 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q00474-F1-model_v4 | 33 | 483 | 1 | 398 | 0.6702 |
0.7499 |
| AF-O32270-F1-model_v4 | 5 | 481 | 3 | 485 | 0.6491 |
0.6823 |
| AF-Q02729-F1-model_v4 | 9 | 478 | 1 | 405 | 0.6173 |
0.7142 |
| AF-Q9HUG6-F1-model_v4 | 47 | 478 | 14 | 390 | 0.6138 |
0.7253 |