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PROTEIN: HRGMv2_4332_18_19

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4332_18_19.pdb
Genome ID:
HRGMv2_4332
Protein ID:
HRGMv2_4332_18_19

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRERLSKKIE   PVHLYSSNKY   LESTFHWAIK   KQQQFVMTGK   KGIINKDEEN   PEGDHTGIHD 60
YIPSYWAGYY   DRTAFYSRDF   VHQVIGAHMG   GLDEENYSMF   KAFVKGATKE   RKWYTPWAFN 120
FDGTPHTIDF   KHDDYFVREV   PVQFELVEKA   YRQYLWSGDS   RYLYDEDFWN   FYTKVMTEFI 180
TLHDTNNNGI   AEGSGKGIFE   GTCSYNERSG   EALLEAGDAI   GSQYQAMLAY   GSMLEKRGDT 240
KAKAWHVKAQ   KLKDYFNQIW   SVADSMESGY   VRAWGINGER   YSDFASENTW   FIPLKMITEP 300
GERNSKYIDF   ILDNLGEGIG   TTPLAPNNLE   AYTYIPDMLF   LYNRNEEAWK   WMKYITSVKN 360
VPHERPSQGR   NGDYPEISFT   FVSQIIEGMM   GIEPDAHKHM   LATLPRLPKE   VCDVSVEHLM 420
IGENELVVSY   QGNTFASVTN   VRGTSVLWEA   GFYGIHEEIC   IGDKRVKSKQ   KLVNGLIISY 480
TVLELRPGMT   NTVYVINP 498
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1C1CTY2-F1-model_v4 4 498 22 683 0.7022 0.8247
AF-Q8DN33-F1-model_v4 6 393 11 434 0.6258 0.7564
AF-A0JMP0-F1-model_v4 7 496 189 639 0.6166 0.7765
AF-Q9C560-F1-model_v4 9 475 22 485 0.6086 0.6655
AF-Q8BP56-F1-model_v4 6 496 233 681 0.6055 0.781
AF-D3ZY02-F1-model_v4 7 496 233 681 0.6044 0.7835
AF-Q10449-F1-model_v4 6 432 59 509 0.5962 0.7089
AF-Q54KX5-F1-model_v4 6 498 261 704 0.596 0.7876
AF-X8FBP7-F1-model_v4 8 494 225 722 0.592 0.7225
AF-Q32M88-F1-model_v4 7 496 234 682 0.5918 0.7839
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
SDT82934.1 CBM13 1 497 52 806 0.7753 0.9632
AF-Q8PT90-F1-model_v4 GH176 7 442 1 461 0.7376 0.8217
AF-A0A1V0A1D0-F1-model_v4 GH0 6 478 35 509 0.7192 0.778
AF-B2URK0-F1-model_v4 GH63 5 494 3 476 0.7114 0.7479
AF-Q6BR00-F1-model_v4 GH78 6 498 166 660 0.7036 0.8187
A0A5P2B714 CBM51 1 498 17 641 0.7015 0.8976
AF-A0A5P2B714-F1-model_v4 CBM51 1 498 17 641 0.7015 0.8976
AF-A0A8A3P277-F1-model_v4 GH78 5 497 17 694 0.699 0.8293
AF-A0A2K8P7R2-F1-model_v4 CBM51 1 498 18 643 0.6989 0.8951
AF-A0A2Z5JQ18-F1-model_v4 CBM51 8 498 138 608 0.6964 0.9282
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
SDT82934.1 CBM13 1 497 52 806 0.7753 0.9632
E1R8A1 GH63 8 497 8 479 0.7449 0.787
A1QZG9 GH63 6 497 12 485 0.7306 0.7737
A0A1D7QBQ1 GH78 24 498 1 400 0.7226 0.8232
A0A160SYC4 GH63 6 496 28 501 0.7201 0.7749
A0A7H8QNH6 GH78 5 498 32 688 0.7037 0.8303
A0A5P2B714 CBM51 1 498 17 641 0.7015 0.8976
A0A8A3P277 GH78 5 497 17 694 0.699 0.8293
A0A7U3VMJ0 GH78 1 498 36 708 0.6884 0.8158
W0IX45 GH63 5 494 22 511 0.6873 0.7233
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7qsj-assembly2.cif.gz_B 8 474 1 339 0.655 0.798
5z74-assembly1.cif.gz_B 22 474 1 432 0.6376 0.6958
5z3d-assembly1.cif.gz_A 16 417 2 371 0.637 0.7441
5z3f-assembly1.cif.gz_A 16 417 2 371 0.6368 0.7439
5z3c-assembly1.cif.gz_A 16 417 2 371 0.6362 0.7433
5goq-assembly1.cif.gz_C-2 13 474 1 439 0.622 0.6748
3cih-assembly1.cif.gz_A 1 498 1 714 0.6209 0.7387
3on6-assembly1.cif.gz_B 6 413 13 441 0.6191 0.7227
3ren-assembly2.cif.gz_B 15 414 1 332 0.6017 0.7348
8ho9-assembly1.cif.gz_A 6 498 307 811 0.582 0.7331
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P94250-F1-model_v4 7 497 2 474 0.7391 0.776
AF-A0JMP0-F1-model_v4 7 496 189 639 0.6166 0.7765
AF-Q9C560-F1-model_v4 9 475 22 485 0.6086 0.6655
AF-Q8BP56-F1-model_v4 6 496 233 681 0.6055 0.781
AF-F1NZI4-F1-model_v4 6 496 244 690 0.6039 0.7883
AF-Q10449-F1-model_v4 6 432 59 509 0.5962 0.7089
AF-Q54KX5-F1-model_v4 6 498 261 704 0.596 0.7876
AF-Q32M88-F1-model_v4 7 496 234 682 0.5918 0.7839
AF-Q76IQ9-F1-model_v4 7 498 295 801 0.5841 0.7338
AF-Q9F8X1-F1-model_v4 7 498 295 800 0.5841 0.7335
Download Full SwissProt Results