PROTEIN: HRGMv2_4322_2_20
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Protein File & Metadata
Source:
HRGMv2_4322_2_20.pdb
Genome ID:
Protein ID:
HRGMv2_4322_2_20
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Protein Sequence
MRKNVRRWLS VTTVATMTAA SLAACGSSQP AATTAAPAET KAETAAATEA ASEAATETAS 60 DEGKVLNIQC WNEEFKSRLT DHYPGYEVVD GTTGKIGDVT VKWTITPSDD NAYQNNLDTV 120 LPENESASAD SKVDLFLVEA DYAKKYVDSD VEVTVPVKDL GLSDDELKNQ YQYTKDVVTD 180 GDGNLRGVSW QGCPGVLIYN RQAAKDVLGS DDPADVQEAV KDWDAFNETA KKLKDGGYTV 240 TSSVNDSYRV YSNNVTTPWV TDGKISIDDN IKHWVDDSKA LVDAGETHTY ELWSDDWSKG 300 FYPDGKVFCY FGPAWLINFS MAADTDGSIA NQGGWGAVEG PQGFYWGGTW ICAAKGTDNP 360 TLVADIMRQL TTNEQIMTDI VKKDNDFVNN KPAMESAAKD DSFAFQVLGG QNPLELFCAG 420 ADKIDLSNMT NYDQGCNEEF QNAMKNYFDG NASYEDALNL FYTAVEEKYP ELSH 474
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EWS9-F1-model_v4 | 57 | 473 | 46 | 463 | 0.6989 |
0.7967 |
| AF-Q8DRJ6-F1-model_v4 | 60 | 474 | 59 | 500 | 0.5328 |
0.643 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 60 | 470 | 1 | 393 | 0.8024 |
0.8902 |
| 8bfy-assembly1.cif.gz_A | 64 | 471 | 2 | 393 | 0.7451 |
0.8341 |
| 3uor-assembly2.cif.gz_B | 58 | 473 | 1 | 388 | 0.7417 |
0.8377 |
| 6x84-assembly2.cif.gz_B | 60 | 473 | 1 | 411 | 0.7373 |
0.8079 |
| 7vfq-assembly1.cif.gz_A | 58 | 474 | 1 | 394 | 0.7349 |
0.8188 |
| 2z8d-assembly2.cif.gz_B | 58 | 474 | 1 | 399 | 0.7343 |
0.8141 |
| 7vfq-assembly2.cif.gz_B | 58 | 474 | 1 | 396 | 0.7341 |
0.8161 |
| 2z8d-assembly1.cif.gz_A | 59 | 474 | 1 | 401 | 0.7336 |
0.8119 |
| 7vfr-assembly1.cif.gz_A | 58 | 474 | 1 | 397 | 0.7332 |
0.8145 |
| 7vfq-assembly4.cif.gz_D | 58 | 474 | 1 | 397 | 0.7321 |
0.8134 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 60 | 470 | 25 | 422 | 0.7476 |
0.85 |
| AF-Q8YCA7-F1-model_v4 | 63 | 473 | 25 | 433 | 0.6843 |
0.7717 |
| AF-P58300-F1-model_v4 | 44 | 472 | 44 | 434 | 0.6478 |
0.7631 |
| AF-D4GP35-F1-model_v4 | 11 | 474 | 16 | 459 | 0.644 |
0.6952 |
| AF-Q9V297-F1-model_v4 | 28 | 472 | 35 | 453 | 0.6342 |
0.7166 |