PROTEIN: HRGMv2_4314_4_12
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Protein File & Metadata
Source:
HRGMv2_4314_4_12.pdb
Genome ID:
Protein ID:
HRGMv2_4314_4_12
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Protein Sequence
MKKQFKKGIA LLLAATMMFS VVGCSAKKDK NNNSKETQSS VEDTTESTEG TETTDAAQSG 60 EVTPGWQQNA DEKVDFTWYI NFSWFTTPWG ENLVSKKITE ETGCNIEFIV PAGNEAEKLN 120 SLIASDTLPD ILTLGWYEGQ VNQMIEDGMV YALDELANEY DPYWFEVADE GRVGWFTQDD 180 GHIYGYPNSS FSPQDYEKYD NISSNQTFLV KKDIYEAIGS PDMTTPEGFK AAVRAAAEQF 240 PEVNGQPLIP IGAHEFGTTG NVSFDQYLSN FLAIPYEKDG QYYDRYTDPE LVRWLKTFRE 300 LGEEGYLADD IFIDKRAQME EKIAQGRYFC MLYQRTDLQD QEKILYANDP NSIYIAVDGP 360 KNSKGDDYTL PGTGINGWCV NMISKNCKNP DRAIQLFSYF MSEHGQHMTW LGVEGETWDY 420 DANGVEKMYD DVKELCNTDR SAYDQKYGAD STYWMFQDNA MALKWAEPTP EPLGQMERWT 480 FPYVMTTSQY DITLEADSEE ADIKSKIDNE WGVVLPQLLL AKSDEEFDKI WNSFLEKREG 540 YGLDKVIEKQ TELMNNAKEK LGVN 564
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O53485-F1-model_v4 | 1 | 553 | 3 | 439 | 0.5541 |
0.6423 |
| AF-Q7AQ51-F1-model_v4 | 11 | 550 | 13 | 445 | 0.5519 |
0.6484 |
| AF-K0F1Y0-F1-model_v4 | 43 | 550 | 27 | 433 | 0.5392 |
0.6587 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 24 | 564 | 17 | 506 | 0.6406 |
0.7163 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 24 | 564 | 17 | 506 | 0.6406 |
0.7163 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5g5y-assembly1.cif.gz_A | 72 | 562 | 1 | 494 | 0.7493 |
0.8187 |
| 6fth-assembly1.cif.gz_A | 72 | 564 | 2 | 496 | 0.7065 |
0.7744 |
| 3omb-assembly1.cif.gz_A | 71 | 564 | 5 | 503 | 0.7039 |
0.7749 |
| 5xs8-assembly1.cif.gz_A | 75 | 558 | 1 | 474 | 0.6556 |
0.732 |
| 5g62-assembly2.cif.gz_B | 75 | 564 | 1 | 491 | 0.6447 |
0.711 |
| 3vlw-assembly2.cif.gz_B | 66 | 564 | 1 | 489 | 0.6398 |
0.7063 |
| 5h6u-assembly1.cif.gz_A | 66 | 564 | 1 | 487 | 0.6379 |
0.7055 |
| 4tqu-assembly1.cif.gz_Q | 66 | 564 | 2 | 492 | 0.6375 |
0.7041 |
| 6jhx-assembly2.cif.gz_B | 66 | 564 | 2 | 483 | 0.6325 |
0.7035 |
| 7eho-assembly2.cif.gz_B | 75 | 550 | 1 | 402 | 0.6143 |
0.7326 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H2URD6-F1-model_v4 | 23 | 562 | 16 | 538 | 0.7191 |
0.7735 |
| AF-Q795R2-F1-model_v4 | 25 | 559 | 13 | 498 | 0.6895 |
0.7684 |
| AF-P37966-F1-model_v4 | 27 | 564 | 9 | 502 | 0.6749 |
0.7458 |
| AF-O34335-F1-model_v4 | 18 | 554 | 13 | 421 | 0.5407 |
0.6514 |