PROTEIN: HRGMv2_4312_37_12
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_4312_37_12.pdb
Genome ID:
Protein ID:
HRGMv2_4312_37_12
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKKKVVFVLA IILLLVVARV YAVIDRTTDI YNSQIESSDY VAVGLTENKI VEQKFKSVED 60 YLDGMSIKLD VSGNPGSVTL EYTLIEAESQ KEVAQGEMSL EDVRSGKFFP LEFERVNESK 120 GKTYIFKITV KECDENSVVS VYYANDILVA RTLRHGFDLE TFIITVCFMA YVLVFMKWLS 180 KLFNQGNRM 189
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P38819-F1-model_v4 | 35 | 176 | 16 | 150 | 0.4443 |
0.6542 |
| AF-Q9D2R4-F1-model_v4 | 36 | 171 | 13 | 143 | 0.4341 |
0.6584 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q97GN9-F1-model_v4 | GT0 , GT2 | 1 | 159 | 523 | 944 | 0.4011 |
0.8083 |
| AF-A0A1S8M8R4-F1-model_v4 | GT2 , GT4 | 1 | 158 | 383 | 944 | 0.3979 |
0.8068 |
| AF-A0A0E3PR73-F1-model_v4 | GT2 | 1 | 184 | 184 | 1066 | 0.3928 |
0.7034 |
| AF-A0A0E3QJR3-F1-model_v4 | GT2 | 11 | 175 | 77 | 641 | 0.3891 |
0.7193 |
| A0A2N9YI34 | GT2 , GT4 | 11 | 189 | 285 | 945 | 0.388 |
0.7307 |
| AF-R4K848-F1-model_v4 | GT0 , GT2 | 3 | 158 | 531 | 925 | 0.3873 |
0.7889 |
| AF-A0A0E3L941-F1-model_v4 | GT2 | 13 | 189 | 302 | 1097 | 0.3858 |
0.717 |
| AF-A0A7S8EVX5-F1-model_v4 | GT2 | 25 | 189 | 725 | 890 | 0.3623 |
0.6871 |
| AF-A0A0E3PHH4-F1-model_v4 | GT2 | 20 | 175 | 426 | 990 | 0.3616 |
0.7544 |
| AF-A0A0H3J786-F1-model_v4 | GT0 , GT2 | 14 | 158 | 534 | 937 | 0.3592 |
0.7869 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0E3PR73 | GT2 | 1 | 184 | 184 | 1066 | 0.3928 |
0.7034 |
| A0A2N9YI34 | GT2 , GT4 | 11 | 189 | 285 | 945 | 0.388 |
0.7307 |
| A0A0E3L941 | GT2 | 13 | 189 | 302 | 1097 | 0.3858 |
0.717 |
| A0A090AIX6 | GT2 , GT4 | 16 | 189 | 297 | 1021 | 0.3751 |
0.7326 |
| A0A136Q663 | GT2 | 15 | 170 | 47 | 425 | 0.3627 |
0.6996 |
| A0A7S8EVX5 | GT2 | 25 | 189 | 725 | 890 | 0.3623 |
0.6871 |
| APF22786.1 | GT2 | 10 | 153 | 2 | 806 | 0.3518 |
0.7371 |
| D2RDR5 | GT2 | 1 | 161 | 128 | 603 | 0.3498 |
0.7082 |
| A0A2P8MIG1 | GT0 , GT2 | 34 | 159 | 791 | 944 | 0.3421 |
0.8596 |
| AIN57274.1 | GT2 | 26 | 153 | 1110 | 1248 | 0.3274 |
0.8278 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P38819-F1-model_v4 | 35 | 176 | 16 | 150 | 0.4443 |
0.6542 |
| AF-P27869-F1-model_v4 | 36 | 171 | 13 | 143 | 0.4347 |
0.6602 |
| AF-Q9D2R4-F1-model_v4 | 36 | 171 | 13 | 143 | 0.4341 |
0.6584 |