PROTEIN: HRGMv2_4309_2_9
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Protein File & Metadata
Source:
HRGMv2_4309_2_9.pdb
Genome ID:
Protein ID:
HRGMv2_4309_2_9
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Protein Sequence
MKKRTMSFIL CAAMAGTALL GQTVVYAEEA EQGKILNIYC WNEEFKTRIT DHYADYEEVD 60 ATTGKIGDIT VKWNITPNDD NAYQNNLDAT LLKQADAAAD EKVDIFLVEA DYALKYVDSE 120 YTMPVADLGI TDADLEKQYP YTKDVVTDSD GVLKGLSWQG CPGVLFYNRE AAKEVLGTED 180 PAEVQEYVKD WKTFKETAAA MKEAGYTIMS SVNDSYRVYS NNVTSKWVED GKINIDENIM 240 KWVEDSKELV DAGETGTYEL WSDDWSKGFY PEGKVFCYFG PAWLVNFSMA ADTEGSIGNA 300 GGWGAAEGPQ GFFWGGTWIC AATGTDNGDV IKDIMLKMTT DDGVMKEIVV DDDDFVNNQT 360 VMNEMAEDTG YASQILGGQN PLGIYCAGVE DLDLGNLSPY DQGCNEEFQN AMKNYFEGNA 420 SMEEALDLFY TAVEEKYPEL THE 443
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F002-F1-model_v4 | 5 | 441 | 31 | 439 | 0.723 |
0.794 |
| AF-A0A133CPC5-F1-model_v4 | 28 | 443 | 30 | 423 | 0.7214 |
0.8071 |
| AF-A0A0H3GHK7-F1-model_v4 | 31 | 441 | 21 | 427 | 0.7158 |
0.7891 |
| AF-A0A132Z3C8-F1-model_v4 | 32 | 441 | 32 | 428 | 0.7135 |
0.7988 |
| AF-Q8DNN7-F1-model_v4 | 32 | 441 | 33 | 436 | 0.7063 |
0.7844 |
| AF-P71619-F1-model_v4 | 30 | 441 | 34 | 428 | 0.7028 |
0.7965 |
| AF-K0F8J3-F1-model_v4 | 31 | 441 | 28 | 436 | 0.7011 |
0.7695 |
| AF-K0F2E6-F1-model_v4 | 30 | 441 | 41 | 436 | 0.6993 |
0.7953 |
| AF-Q7AQ51-F1-model_v4 | 32 | 442 | 33 | 444 | 0.6992 |
0.7712 |
| AF-K0F1Y0-F1-model_v4 | 13 | 441 | 29 | 433 | 0.6991 |
0.7724 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 28 | 441 | 467 | 866 | 0.537 |
0.7834 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K8EJG7 | CBM50 , CE4 | 30 | 442 | 32 | 416 | 0.6746 |
0.768 |
| K8E205 | GH32 | 31 | 420 | 32 | 344 | 0.6348 |
0.7946 |
| A0A7U1BNH7 | GH10 | 31 | 443 | 28 | 734 | 0.5531 |
0.7454 |
| A0A9Q8PNJ5 | GH4 | 28 | 441 | 467 | 866 | 0.537 |
0.7834 |
| UJP10085.1 | GH154 | 1 | 421 | 268 | 1170 | 0.4332 |
0.6949 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ixp-assembly1.cif.gz_A | 31 | 441 | 1 | 393 | 0.8049 |
0.8693 |
| 8bfy-assembly1.cif.gz_A | 33 | 439 | 1 | 393 | 0.7748 |
0.8407 |
| 2z8d-assembly2.cif.gz_B | 28 | 443 | 1 | 399 | 0.7546 |
0.8132 |
| 7vfq-assembly1.cif.gz_A | 32 | 443 | 1 | 394 | 0.7525 |
0.8152 |
| 7vfq-assembly2.cif.gz_B | 32 | 443 | 1 | 396 | 0.7524 |
0.813 |
| 2z8d-assembly1.cif.gz_A | 29 | 443 | 1 | 401 | 0.7522 |
0.8092 |
| 7c0k-assembly1.cif.gz_A | 32 | 441 | 14 | 396 | 0.7515 |
0.8355 |
| 7vfq-assembly4.cif.gz_D | 32 | 443 | 1 | 397 | 0.7505 |
0.8102 |
| 7c0x-assembly2.cif.gz_B | 32 | 441 | 13 | 395 | 0.7503 |
0.8331 |
| 7vfr-assembly1.cif.gz_A | 32 | 443 | 1 | 397 | 0.7502 |
0.8103 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P29822-F1-model_v4 | 31 | 439 | 26 | 422 | 0.754 |
0.8349 |
| AF-P94528-F1-model_v4 | 32 | 442 | 32 | 433 | 0.7502 |
0.8303 |
| AF-Q9KEE7-F1-model_v4 | 32 | 442 | 43 | 445 | 0.7415 |
0.8299 |
| AF-Q9K491-F1-model_v4 | 14 | 440 | 15 | 424 | 0.7316 |
0.7934 |
| AF-Q578M8-F1-model_v4 | 31 | 442 | 23 | 410 | 0.72 |
0.8071 |
| AF-Q8FVS7-F1-model_v4 | 31 | 442 | 23 | 410 | 0.72 |
0.807 |
| AF-Q2YKZ9-F1-model_v4 | 31 | 442 | 23 | 410 | 0.7197 |
0.8069 |
| AF-Q926H8-F1-model_v4 | 31 | 441 | 19 | 428 | 0.7177 |
0.7815 |
| AF-O07009-F1-model_v4 | 19 | 441 | 22 | 419 | 0.711 |
0.7887 |
| AF-Q8YCA7-F1-model_v4 | 31 | 441 | 24 | 433 | 0.7097 |
0.7758 |