PROTEIN: HRGMv2_4304_3_116
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Protein File & Metadata
Source:
HRGMv2_4304_3_116.pdb
Genome ID:
Protein ID:
HRGMv2_4304_3_116
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Protein Sequence
MSNAVGMAII FIFFLLIVAF WYQIAGISVE ESMVMTAVLI MLSVLGAGLF GNAKYSYIIL 60 AIFAAVGLFA FLANMGARRH NRMCLKTRMA GFFSPSLIII AGVFLYALIF FRKGLYTYPD 120 EVYQWGNSLK YMAESGRLPF GNEFTGASIT LSACTMFQYF WIGLFPFVES NSFVGNFLLI 180 FIPIMLLMKD VGWKDWKTVF LYAVSIFFAM NLFSYVKYYS LLQDWVLPMW TGSIIAWLLW 240 RCEKKINWIL LIGSLVCIGS MKSLVGPLFG LMIFLVAAVK SFVENGFTEK PLQTLKNMAH 300 KGYIFLGIAG IVSVFSINIV WSSVLRDNVL SRGGNISGKS PGNILSLMIK KIFMTLGNAD 360 AGAPFFSYVI FAAVFAAGFY FLRGMIKNIS QKKVMTVVFS LYLFGFVAYF FIMYYAYLNI 420 FGVGDSRSVA GLERYLSYYM LVGLVPLIAP LFCKNIAVKN RKLLKNVSIG ILVFCMFGTG 480 NGFISKATTI NRKDESSWKL RTKVSKEINR LNKLIDTDGP ILIVGKLKEN TVKMYTYELG 540 TQYRWDKDSY TVYNKESGTR MILDVVQNPK LVEDEGYEYI WFIDPEEEND EYHKLKDTYG 600 LKSIENGDLY KLIPKDEGSE SVYLGNTK 628
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CD98-F1-model_v4 | 1 | 619 | 1 | 652 | 0.6446 |
0.6869 |
| AF-P72045-F1-model_v4 | 1 | 619 | 1 | 663 | 0.6403 |
0.6882 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-C9LV70-F1-model_v4 | GT83 | 28 | 621 | 1 | 493 | 0.6058 |
0.6944 |
| AF-A0A3G6MPA3-F1-model_v4 | GT89 | 94 | 625 | 4 | 580 | 0.5719 |
0.6626 |
| QAX32140.1 | GT89 | 94 | 618 | 24 | 550 | 0.5719 |
0.6535 |
| UYV16966.1 | GT2 | 91 | 619 | 275 | 784 | 0.513 |
0.694 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| C9LV70 | GT83 | 28 | 621 | 1 | 493 | 0.6058 |
0.6944 |
| A0A7L5ALX8 | GT83 | 87 | 625 | 21 | 507 | 0.5849 |
0.6864 |
| A0A7I0E4J1 | GT83 | 81 | 623 | 17 | 517 | 0.5786 |
0.6696 |
| A0A5Q0C359 | GT83 | 81 | 623 | 9 | 486 | 0.5751 |
0.6748 |
| QAX32140.1 | GT89 | 94 | 618 | 24 | 550 | 0.5719 |
0.6535 |
| D3Q9F6 | GT2 | 52 | 624 | 153 | 783 | 0.5301 |
0.6497 |
| UYV16966.1 | GT2 | 91 | 619 | 275 | 784 | 0.513 |
0.694 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8if8-assembly1.cif.gz_B | 21 | 614 | 3 | 620 | 0.5985 |
0.6458 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.