PROTEIN: HRGMv2_4246_221_4
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Protein File & Metadata
Source:
HRGMv2_4246_221_4.pdb
Genome ID:
Protein ID:
HRGMv2_4246_221_4
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Protein Sequence
MLGPALAGFL LWVLNDAVKT GKRRLYFMAR DGYFMYRAAL IFCGRFHLPV ECRYLSCSRY 60 CVRLPAFHLN QKAALEYICR DALEVTLGTV FSRAGLTTEE MQEVLAVCPF PWSLSEKLAS 120 SDLPKIRQKL EHCGRFLHYM NQHSQKEMPN LEGYLRQEGL LDGISDAVVD SGWTGSLQKT 180 LNEVLSCMGR KKSLKGYYWG LYEIPAHVRR EDYRCYYFGP RGKIRRKVYF NNCLFEAVYS 240 APHGMTLGYV RRGELYYPIY EEIVEKRKDF TQKEGSYLME YVRNLAENTG TFGIKEIGFW 300 QDRKVIEKLF RLFMCRPTGK EAAVFGRIPF SDEGLGREEA PLAAEIKPQD LKGSRIFRQL 360 MHRLKGTKRK GRRSAWQEGS IVLSRKNVNR NLRSYTRYKY LRFLKKEAER IRKETALRHG 420
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 1 | 393 | 250 | 631 | 0.6475 |
0.8571 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-W0DNV7-F1-model_v4 | GT2 | 1 | 409 | 682 | 1091 | 0.5824 |
0.8658 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 1 | 408 | 662 | 1067 | 0.5791 |
0.8615 |
| A0A1I7GMF6 | GT2 | 1 | 404 | 680 | 1083 | 0.578 |
0.8676 |
| AF-A0A0U5F758-F1-model_v4 | GT2 | 1 | 401 | 20 | 403 | 0.5656 |
0.7628 |
| A0A974WXG9 | GT4 | 1 | 398 | 685 | 1075 | 0.5595 |
0.8692 |
| A0A9J7AXY3 | GT2 | 1 | 408 | 18 | 400 | 0.555 |
0.7833 |
| V4JBH5 | GT2 | 1 | 403 | 14 | 397 | 0.5509 |
0.7853 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 1 | 401 | 21 | 405 | 0.5479 |
0.7903 |
| QRK05458.1 | GT4 | 1 | 419 | 280 | 994 | 0.5371 |
0.7977 |
| AF-M4S1R1-F1-model_v4 | GT4 | 1 | 397 | 258 | 699 | 0.5309 |
0.7999 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2I6S8V6 | GT2 | 1 | 408 | 662 | 1067 | 0.5791 |
0.8615 |
| A0A1I7GMF6 | GT2 | 1 | 404 | 680 | 1083 | 0.578 |
0.8676 |
| A0A0U5F758 | GT2 | 1 | 401 | 20 | 403 | 0.5656 |
0.7628 |
| A0A974WXG9 | GT4 | 1 | 398 | 685 | 1075 | 0.5595 |
0.8692 |
| A0A9J7AXY3 | GT2 | 1 | 408 | 18 | 400 | 0.555 |
0.7833 |
| V4JBH5 | GT2 | 1 | 403 | 14 | 397 | 0.5509 |
0.7853 |
| A0A0H3KC95 | GT2 | 1 | 401 | 21 | 405 | 0.5479 |
0.7903 |
| QRK05458.1 | GT4 | 1 | 419 | 280 | 994 | 0.5371 |
0.7977 |
| M4S1R1 | GT4 | 1 | 397 | 258 | 699 | 0.5309 |
0.7999 |
| W8KPG0 | GT2 | 1 | 405 | 18 | 398 | 0.5307 |
0.7831 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 1 | 328 | 261 | 591 | 0.5746 |
0.8536 |
| 8a0m-assembly1.cif.gz_B | 1 | 397 | 513 | 876 | 0.5242 |
0.8371 |
| 8a0c-assembly1.cif.gz_A | 1 | 397 | 651 | 1028 | 0.5228 |
0.8408 |
| 8a0m-assembly2.cif.gz_C | 1 | 397 | 647 | 1024 | 0.5224 |
0.8388 |
| 8a0m-assembly1.cif.gz_A | 1 | 397 | 646 | 1023 | 0.5212 |
0.8361 |
| 8a0c-assembly1.cif.gz_B | 1 | 397 | 651 | 1025 | 0.5137 |
0.8313 |
| 8a0m-assembly2.cif.gz_D | 1 | 397 | 542 | 887 | 0.4918 |
0.8247 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.