PROTEIN: HRGMv2_4246_10_6
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Protein File & Metadata
Source:
HRGMv2_4246_10_6.pdb
Genome ID:
Protein ID:
HRGMv2_4246_10_6
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Protein Sequence
MAKVIYAKYS NERSRKFCIR TEILEEQDKT RYVRKLPANP QAREHVSNLY KWYELFSSEK 60 GQSAVVYNKC QKQKEAVCLE YVEAPSLETV LDSCLENAEV DKAAELFRKY LRIIQELYEK 120 VPFVKTPRFQ EVFGDARLPE GLKCALVTNI DTVCGNIVLT EPATIIDYEW TFDFPVPAGY 180 VIYRMIHYYI DCRNIRSVLK SYNLYEEFQI TPELQNTYKK MEKAFQAYIT GKHVPMREMF 240 RSITPGVGRM DFLKEERLQV YYSFGETYCE ENTLNYPIKE NKVAVTVVLP ENVRKIRLDP 300 GDKACAVKIR TLMFKGKKKQ PDFQVPEGTT LGGWIYIGKD DPNIDGIQVP KGCTQLRVEM 360 EIHPFNGECI RELVRDTRKL EEQNRRQKRL IEDMQNTKVW KLYQSYRKKV EKR 413
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q9AGZ0-F1-model_v4 | GT2 | 2 | 376 | 1 | 266 | 0.4378 |
0.802 |
| A0A4P9E9V2 | GT2 , GT4 | 1 | 412 | 300 | 1364 | 0.4302 |
0.7104 |
| AF-D9R088-F1-model_v4 | GT2 , GT4 | 1 | 366 | 1 | 737 | 0.4243 |
0.6778 |
| A0A239QLG0 | GT2 | 1 | 251 | 1 | 271 | 0.3817 |
0.8554 |
| C6LFR9 | GT2 , GT4 | 1 | 381 | 300 | 659 | 0.3769 |
0.706 |
| A0A829WPC6 | GT2 , GT4 | 1 | 334 | 262 | 537 | 0.373 |
0.8283 |
| QWT52131.1 | GT2 | 1 | 311 | 1 | 449 | 0.3725 |
0.6989 |
| A0A2T4T973 | GT2 , GT4 | 1 | 361 | 47 | 963 | 0.3665 |
0.6259 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 388 | 232 | 490 | 0.3434 |
0.7892 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P9E9V2 | GT2 , GT4 | 1 | 412 | 300 | 1364 | 0.4302 |
0.7104 |
| A0A239QLG0 | GT2 | 1 | 251 | 1 | 271 | 0.3817 |
0.8554 |
| C6LFR9 | GT2 , GT4 | 1 | 381 | 300 | 659 | 0.3769 |
0.706 |
| A0A829WPC6 | GT2 , GT4 | 1 | 334 | 262 | 537 | 0.373 |
0.8283 |
| QWT52131.1 | GT2 | 1 | 311 | 1 | 449 | 0.3725 |
0.6989 |
| A0A2T4T973 | GT2 , GT4 | 1 | 361 | 47 | 963 | 0.3665 |
0.6259 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.