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PROTEIN: HRGMv2_4245_19_8

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4245_19_8.pdb
Genome ID:
HRGMv2_4245
Protein ID:
HRGMv2_4245_19_8

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKKVLSVLL   AASISVTPLW   GCSSQNPSDN   SQESSQTAGG   EEEPITISWL   AYQTDAQPDP 60
DSKIVKAVEE   RYNVKFDFWF   VDNQKWDDTL   NVRFAAGEMP   DVFRLKTKGN   LNKYVQQGVV 120
GELPIEMIEE   KAPNYMKMVE   EYDTENLMWM   PTRINGKNYG   FTFPAIRNTY   PTSLVWRLDW 180
LKAVGIDKVP   ETLEEFETAM   YKFAKEDPDG   NGVDDTYGLS   NTVMGTVLGS   FGPMAIRDFK 240
GNPLPDLRWQ   RDGEGVKLSA   LTEETRQGLE   LLQKWYRDGV   IDPEFITGEN   TGGYWALSQA 300
FINGRVGVTG   NVMYDHWVPP   LSEGDLGGSV   YQEFIKVNPD   LVYGEDFILG   TAPVGPEGVS 360
GTDLWGYVSE   TMVLSSQCVK   DQKKVDIILQ   MLDDFVADEE   YSMMIRHGFE   GEDYILGEDG 420
SVIPQVTDSA   ARVQKGIQVF   TFLSSIPEYE   KKYSPKLYEF   ADANKGTGHV   ILPVPSTDAA 480
TQYLTTLQTL   TVEYFTKIVT   GEYSIDQFDE   YVEKMRQNGA   DELEKQTSEA   WIAQQE 536
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 39 536 33 502 0.7114 0.7987
AF-A0A133D019-F1-model_v4 11 536 18 485 0.6889 0.7663
AF-Q8DNU8-F1-model_v4 3 526 1 440 0.6875 0.7752
AF-A0A133CPC5-F1-model_v4 27 523 17 423 0.6673 0.7886
AF-A0A0H3GX53-F1-model_v4 31 526 12 428 0.6537 0.7609
AF-Q8DRJ6-F1-model_v4 18 536 43 512 0.6511 0.7426
AF-Q9CBN6-F1-model_v4 17 523 14 446 0.6461 0.7404
AF-A0A0H3GKX2-F1-model_v4 12 522 17 396 0.6434 0.7821
AF-P19576-F1-model_v4 10 522 17 396 0.6431 0.7814
AF-P0AEX9-F1-model_v4 12 522 17 396 0.6426 0.7812
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 23 536 20 506 0.758 0.8225
AF-K8EJG7-F1-model_v4 CBM50 , CE4 21 526 15 417 0.6476 0.7667
AF-A0A7U1BNH7-F1-model_v4 GH10 27 529 14 742 0.5135 0.6405
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 526 88 797 0.5133 0.6314
A0A9Q8PNJ5 GH4 1 523 229 866 0.4963 0.632
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 23 536 20 506 0.758 0.8225
K8EJG7 CBM50 , CE4 21 526 15 417 0.6476 0.7667
A0A7U1BNH7 GH10 27 529 14 742 0.5135 0.6405
A0A1Q2TKJ3 GH49 1 526 88 797 0.5133 0.6314
A0A9Q8PNJ5 GH4 1 523 229 866 0.4963 0.632
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5h6u-assembly1.cif.gz_A 41 536 4 487 0.7585 0.8172
5xs8-assembly1.cif.gz_A 43 531 1 474 0.7567 0.8194
3vlw-assembly2.cif.gz_B 41 536 6 489 0.756 0.8161
4tqu-assembly1.cif.gz_Q 41 536 7 491 0.7539 0.8148
6jhx-assembly2.cif.gz_B 41 533 7 483 0.7478 0.8137
6fth-assembly1.cif.gz_A 40 536 1 496 0.7365 0.7829
5g62-assembly2.cif.gz_B 44 536 1 490 0.7309 0.7824
3omb-assembly1.cif.gz_A 38 536 3 503 0.728 0.7753
5g5y-assembly1.cif.gz_A 39 536 1 491 0.7056 0.757
5suo-assembly1.cif.gz_A 44 536 1 451 0.6937 0.7721
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37966-F1-model_v4 33 535 24 502 0.7571 0.8333
AF-A0A0H2URD6-F1-model_v4 19 536 16 535 0.7011 0.7446
AF-Q578M8-F1-model_v4 27 523 8 411 0.6992 0.8182
AF-Q8FVS7-F1-model_v4 28 523 9 411 0.6984 0.8193
AF-Q2YKZ9-F1-model_v4 29 523 10 411 0.6945 0.8167
AF-Q795R2-F1-model_v4 37 536 31 498 0.6862 0.7718
AF-Q9RUE8-F1-model_v4 31 526 9 420 0.6673 0.7781
AF-A0A0H2UMY0-F1-model_v4 1 536 7 490 0.6527 0.7119
AF-O07009-F1-model_v4 40 527 33 421 0.6479 0.7942
AF-Q7LYW7-F1-model_v4 39 526 39 450 0.6478 0.7789
Download Full SwissProt Results