PROTEIN: HRGMv2_4245_16_38
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Protein File & Metadata
Source:
HRGMv2_4245_16_38.pdb
Genome ID:
Protein ID:
HRGMv2_4245_16_38
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Detailed structural information will appear here after analysis...
Protein Sequence
MEKLKQTRKA RIGVYTMGLR HYWDQFAGLR ERLLEYGRFI VDKIEKMGNV EVFFYGLVDC 60 EKEGRAAGEY FASNHVDLIF AHGGTYVTSA SVVPVHQICK APVVVLNLQP AARINYQKTT 120 TGEWLAHCGA CSVPELSNAF HRTGIKFRVV NGLLGLDYTP DISMTNENTA QMPQAKRAWK 180 EIEEWVLAAG VKSGLAHSRF GFLGNTYNGM LDMYSDFTMF QGQTKAHLEV LEMCDLNRMM 240 EAVTQREMEE KRREIEEFFY ISDTGGADPL AQKPTKEQLN WSAKVAAAQE RLVKEYDLDA 300 LTYYYHGAPG NAYEKLQGGF IVGHSLLTAK GIPCAGEGDL KTCLAMKICD LVHKGGSFCE 360 IVVTDYEDGT ILLGHDGPFH LAIAEGKPIL RGMGLFHGKQ GTGVSVEAKV RQGDITNLAC 420 TQTGEGKLKF IITEAQATSG PIMSIGNTQT PVKFKKDPDA YMDEWFAQYP THHFAMSVGH 480 NGSLFEKIGD ILDIPTVVLD K 501
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132ZAR4-F1-model_v4 | 3 | 500 | 1 | 474 | 0.8741 |
0.9109 |
| AF-A0A0H3GN54-F1-model_v4 | 2 | 501 | 1 | 479 | 0.85 |
0.8995 |
| AF-P08202-F1-model_v4 | 2 | 501 | 1 | 479 | 0.8494 |
0.8989 |
| AF-P06189-F1-model_v4 | 2 | 501 | 1 | 479 | 0.8491 |
0.8988 |
| AF-Q32K31-F1-model_v4 | 2 | 501 | 1 | 479 | 0.849 |
0.8985 |
| AF-Q8DN24-F1-model_v4 | 6 | 501 | 1 | 553 | 0.7682 |
0.8481 |
| AF-P44779-F1-model_v4 | 3 | 501 | 2 | 555 | 0.7654 |
0.8413 |
| AF-Q8ZMC6-F1-model_v4 | 4 | 501 | 1 | 556 | 0.765 |
0.8435 |
| AF-A0A0H3GWX4-F1-model_v4 | 4 | 501 | 1 | 556 | 0.7649 |
0.8433 |
| AF-Q32CB6-F1-model_v4 | 4 | 501 | 1 | 556 | 0.7648 |
0.8433 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4lql-assembly1.cif.gz_F | 2 | 500 | 1 | 474 | 0.8615 |
0.8992 |
| 7chl-assembly1.cif.gz_D | 3 | 501 | 1 | 478 | 0.8535 |
0.9032 |
| 4r1p-assembly1.cif.gz_C | 2 | 501 | 1 | 476 | 0.8506 |
0.9019 |
| 7cyy-assembly1.cif.gz_A | 2 | 501 | 1 | 476 | 0.85 |
0.9023 |
| 7cyy-assembly1.cif.gz_E | 3 | 501 | 1 | 472 | 0.8498 |
0.9056 |
| 2ajt-assembly1.cif.gz_A | 2 | 501 | 1 | 479 | 0.8494 |
0.8977 |
| 7cxo-assembly1.cif.gz_C | 6 | 501 | 1 | 468 | 0.8485 |
0.9061 |
| 4f2d-assembly1.cif.gz_A | 2 | 501 | 1 | 479 | 0.848 |
0.896 |
| 7cyy-assembly1.cif.gz_F-2 | 3 | 501 | 1 | 473 | 0.8465 |
0.9014 |
| 7cyy-assembly1.cif.gz_D | 3 | 501 | 1 | 470 | 0.8449 |
0.9026 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q03XW2-F1-model_v4 | 3 | 500 | 1 | 474 | 0.8782 |
0.9148 |
| AF-Q88S84-F1-model_v4 | 3 | 500 | 1 | 474 | 0.8773 |
0.9141 |
| AF-Q03PR5-F1-model_v4 | 3 | 500 | 1 | 474 | 0.8772 |
0.914 |
| AF-Q03HQ0-F1-model_v4 | 3 | 500 | 1 | 474 | 0.8762 |
0.9133 |
| AF-Q65J10-F1-model_v4 | 3 | 500 | 1 | 474 | 0.8759 |
0.9131 |
| AF-Q38UH2-F1-model_v4 | 3 | 500 | 1 | 474 | 0.8755 |
0.9124 |
| AF-Q8EMP4-F1-model_v4 | 3 | 500 | 1 | 474 | 0.8746 |
0.9121 |
| AF-Q5WL05-F1-model_v4 | 3 | 501 | 1 | 469 | 0.8723 |
0.9274 |
| AF-Q97JE0-F1-model_v4 | 3 | 501 | 1 | 476 | 0.8662 |
0.9116 |
| AF-Q97JE4-F1-model_v4 | 3 | 501 | 1 | 476 | 0.8658 |
0.9113 |