PROTEIN: HRGMv2_4242_58_7
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Protein File & Metadata
Source:
HRGMv2_4242_58_7.pdb
Genome ID:
Protein ID:
HRGMv2_4242_58_7
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Protein Sequence
MWKNYKAIFF DWDGTAVMSR KAPVDEAVKA MKPLLQKGVK LAIISGTTIE NIAGGKLESY 60 FTQEELDNLY LGLGRGAYNY TFHDGKPYIF KNMVPEKEEL LTIHKICFEI HQELKARYDF 120 DTDIVFSRPN YCKIDLMVSN QRGENLFMQE DELGNLKASL KEHGITSGLQ GLMNLAKEIG 180 RKYDVEVLPT CDAKYLEVGT TSKSDNVDSI FTLIFQESGI LPEECTYWGD EYVGIEKGIF 240 GSDSFMKTEK TAKGDFFDVS EVKGERPEGV QQIGGGVKQF LNFLQEQE 288
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4E4A3-F1-model_v4 | 4 | 288 | 2 | 242 | 0.7258 |
0.819 |
| AF-Q38AW2-F1-model_v4 | 4 | 288 | 2 | 242 | 0.7211 |
0.8147 |
| AF-B5DF46-F1-model_v4 | 5 | 288 | 2 | 242 | 0.7197 |
0.8083 |
| AF-A4IDG8-F1-model_v4 | 4 | 288 | 3 | 243 | 0.7195 |
0.8153 |
| AF-O15305-F1-model_v4 | 3 | 288 | 1 | 246 | 0.7102 |
0.7904 |
| AF-Q86B09-F1-model_v4 | 4 | 288 | 4 | 247 | 0.7086 |
0.7985 |
| AF-Q54X03-F1-model_v4 | 4 | 288 | 4 | 247 | 0.7079 |
0.7986 |
| AF-Q9XUE6-F1-model_v4 | 4 | 288 | 7 | 251 | 0.7051 |
0.7982 |
| AF-A0A077YZW5-F1-model_v4 | 4 | 288 | 4 | 249 | 0.7035 |
0.7901 |
| AF-Q1W376-F1-model_v4 | 4 | 288 | 5 | 245 | 0.7013 |
0.7959 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G9F9S7 | GH73 | 5 | 288 | 3 | 256 | 0.5947 |
0.662 |
| APR83787.1 | GH65 | 1 | 288 | 21 | 312 | 0.5899 |
0.9393 |
| AF-Q6EZE3-F1-model_v4 | GT4 | 5 | 288 | 96 | 382 | 0.5643 |
0.6694 |
| AF-A0A6V7NZT9-F1-model_v4 | GT20 | 1 | 288 | 134 | 395 | 0.5643 |
0.7438 |
| AF-B4FE96-F1-model_v4 | GT4 | 5 | 288 | 100 | 385 | 0.5633 |
0.6711 |
| AF-C4IZ57-F1-model_v4 | GT4 | 5 | 288 | 167 | 454 | 0.5321 |
0.6722 |
| A0A8K1Y6G1 | CBM48 | 3 | 288 | 376 | 653 | 0.4908 |
0.7089 |
| AF-A0A0P0Y112-F1-model_v4 | GT4 | 5 | 288 | 232 | 507 | 0.4895 |
0.6589 |
| AF-D9CJA9-F1-model_v4 | GT4 | 5 | 288 | 259 | 543 | 0.488 |
0.6553 |
| AF-A0A0P0VFN7-F1-model_v4 | GT4 | 5 | 288 | 308 | 594 | 0.4836 |
0.6678 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0G9F9S7 | GH73 | 5 | 288 | 3 | 256 | 0.5947 |
0.662 |
| APR83787.1 | GH65 | 1 | 288 | 21 | 312 | 0.5899 |
0.9393 |
| A0A8K1Y6G1 | CBM48 | 3 | 288 | 376 | 653 | 0.4908 |
0.7089 |
| A0A945A2Q9 | GT20 | 1 | 288 | 430 | 676 | 0.4845 |
0.7888 |
| S9PXJ2 | GT20 | 1 | 288 | 558 | 821 | 0.4783 |
0.7736 |
| A0A383VC54 | CBM48 | 3 | 288 | 456 | 738 | 0.4781 |
0.7038 |
| ADJ26179.1 | GT55 | 4 | 288 | 421 | 696 | 0.4771 |
0.7093 |
| C0PKY3 | GT4 | 5 | 288 | 330 | 613 | 0.4764 |
0.6649 |
| S9Q6Q4 | GT20 | 1 | 287 | 564 | 852 | 0.4737 |
0.7162 |
| A0A077WG75 | GT20 | 1 | 288 | 617 | 874 | 0.4692 |
0.7866 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2i54-assembly1.cif.gz_A | 5 | 288 | 1 | 240 | 0.7116 |
0.8042 |
| 6i5x-assembly1.cif.gz_A | 4 | 288 | 9 | 259 | 0.7049 |
0.7903 |
| 3pgv-assembly4.cif.gz_D | 4 | 288 | 1 | 256 | 0.6931 |
0.7555 |
| 3pgv-assembly3.cif.gz_C | 4 | 288 | 1 | 257 | 0.6913 |
0.7522 |
| 4bnd-assembly2.cif.gz_A | 3 | 288 | 1 | 251 | 0.6889 |
0.765 |
| 4bnd-assembly2.cif.gz_B | 3 | 288 | 1 | 251 | 0.6869 |
0.7644 |
| 3pgv-assembly1.cif.gz_A | 5 | 288 | 1 | 259 | 0.6866 |
0.7432 |
| 2q4r-assembly1.cif.gz_A | 3 | 288 | 1 | 240 | 0.6831 |
0.7715 |
| 1tj5-assembly1.cif.gz_A | 4 | 288 | 2 | 243 | 0.6807 |
0.7648 |
| 5dxo-assembly2.cif.gz_B | 1 | 288 | 6 | 269 | 0.6759 |
0.7419 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q3SZJ9-F1-model_v4 | 2 | 288 | 1 | 246 | 0.7135 |
0.7944 |
| AF-Q60HD6-F1-model_v4 | 2 | 288 | 1 | 246 | 0.712 |
0.793 |
| AF-O15305-F1-model_v4 | 3 | 288 | 1 | 246 | 0.7102 |
0.7904 |
| AF-Q54X03-F1-model_v4 | 4 | 288 | 4 | 247 | 0.7079 |
0.7986 |
| AF-Q9XUE6-F1-model_v4 | 4 | 288 | 7 | 251 | 0.7051 |
0.7982 |
| AF-P42962-F1-model_v4 | 1 | 288 | 4 | 249 | 0.7014 |
0.7829 |
| AF-Q9VTZ6-F1-model_v4 | 3 | 288 | 3 | 254 | 0.6941 |
0.7691 |
| AF-A9CK30-F1-model_v4 | 2 | 288 | 1 | 247 | 0.6922 |
0.7693 |
| AF-Q97C22-F1-model_v4 | 4 | 288 | 1 | 224 | 0.6891 |
0.799 |
| AF-Q92871-F1-model_v4 | 4 | 288 | 11 | 255 | 0.6856 |
0.7879 |