PROTEIN: HRGMv2_4241_14_7
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Protein File & Metadata
Source:
HRGMv2_4241_14_7.pdb
Genome ID:
Protein ID:
HRGMv2_4241_14_7
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Protein Sequence
MSKKNLLIYA HYYVPDTAST GQILRELAEG MLDKFNITVI CVVPSYLGTI EEKYKTKEYY 60 SETINGVKLL RIRVPEFSKT NKVSRVKNIL SYFFGAMAAT IKVGKQDYVF SISQPPDSGR 120 TAWCMGEMDE TCKVYL 136
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1J7-F1-model_v4 | 1 | 136 | 1 | 172 | 0.546 |
0.8312 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A410E087-F1-model_v4 | GT4 | 2 | 129 | 1 | 124 | 0.9081 |
0.969 |
| AF-A0A516TPW3-F1-model_v4 | GT4 | 1 | 136 | 28 | 166 | 0.6805 |
0.9083 |
| AF-A0A6D2G5W5-F1-model_v4 | GT4 | 4 | 136 | 1 | 179 | 0.653 |
0.8367 |
| AF-F0SXR6-F1-model_v4 | GT4 | 1 | 136 | 5 | 142 | 0.6226 |
0.9519 |
| AF-A0A0E3GPP0-F1-model_v4 | GT4 | 1 | 136 | 3 | 140 | 0.6222 |
0.9502 |
| AF-A0A6H1NWH3-F1-model_v4 | GT4 | 1 | 136 | 6 | 143 | 0.6221 |
0.9532 |
| AF-A0A5P8JRZ4-F1-model_v4 | GT4 | 1 | 136 | 1 | 138 | 0.6204 |
0.9505 |
| AF-A0A4P6F8J5-F1-model_v4 | GT4 | 1 | 136 | 3 | 140 | 0.62 |
0.9479 |
| BCW49583.1 | GT4 | 1 | 136 | 5 | 179 | 0.6194 |
0.8597 |
| AF-A0A0B6AMZ9-F1-model_v4 | GT4 | 1 | 136 | 7 | 144 | 0.6189 |
0.949 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A516TPW3 | GT4 | 1 | 136 | 28 | 166 | 0.6805 |
0.9083 |
| BCW49583.1 | GT4 | 1 | 136 | 5 | 179 | 0.6194 |
0.8597 |
| A0A5C0DQN4 | GT4 | 3 | 136 | 1 | 137 | 0.6145 |
0.7771 |
| UZW14940.1 | GT4 | 1 | 136 | 3 | 140 | 0.6125 |
0.9373 |
| E0S179 | GT4 | 1 | 136 | 4 | 147 | 0.6067 |
0.9461 |
| A0A6G6GN30 | GT4 | 1 | 136 | 1 | 139 | 0.6035 |
0.9107 |
| D2QTX0 | GT4 | 1 | 136 | 1 | 138 | 0.6008 |
0.9257 |
| A0A1Y0MNA0 | GT4 | 2 | 136 | 1 | 138 | 0.5975 |
0.9076 |
| UJA19980.1 | GT4 | 1 | 136 | 4 | 180 | 0.5941 |
0.908 |
| A0A5B8V4K2 | GT4 | 4 | 136 | 1 | 136 | 0.5917 |
0.918 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.