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PROTEIN: HRGMv2_4241_12_9

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4241_12_9.pdb
Genome ID:
HRGMv2_4241
Protein ID:
HRGMv2_4241_12_9

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKAKKLLALL   CCVAVTAGAF   VGCGDSSANK   NDSGNTEAKE   PTDDLSEHLE   ITMGGINLSS 60
SDSVEGYPTE   IVEDLEEKFN   VTLTIKNYDN   ESLNLDLSGG   TTTDIVQIND   DHIEGVLKGK 120
HAVNLENYKD   SLAKNIFRDD   MSFRNNVMKT   FKSNGENTQY   FVTPRVTFDD   TEANYGTVLN 180
NGYVVRWDLY   KEIGCPEINN   DDDYIAALKA   MKEIYPETEE   GLPVYAMSAY   NDSQLHSYFY 240
NGCLTQGFIN   LEGGIYVQSV   ENNELYHDLY   DVENPDVLTP   FWSGVSFYNK   LYREGLLDPD 300
CFITKGEDLQ   EKYTKGQYLG   GNVNWYYGTY   NENQRAEDGE   TLKEYVTLPA   KLGWANEKSL 360
AGWFGKYFFV   SSHSPNVERA   VMILDYLQSE   EFSRKVDSGV   EGRWEKGEDG   EPALTEDTIA 420
LKTDGSRLDE   WKKAGIGGTL   SDVCGEDCYN   VAEDGGRICL   WYEDDVLPKS   MTFAEKDMCE 480
TLELGVPSDL   LKRKVEEGIS   MDLGNCLNAI   QMGLETTPKN   IVRIDSNCEE   IALNAIPNLV 540
QAETDEEFAA   AKASLLEELK   GAGVEESIEW   WSNAWSASKE   EIEKLK 586
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133D019-F1-model_v4 47 581 36 485 0.6449 0.7703
AF-Q8DRJ6-F1-model_v4 46 584 60 514 0.5978 0.7262
AF-Q8DNU2-F1-model_v4 27 574 17 445 0.5932 0.7111
AF-A0A133CDW9-F1-model_v4 43 574 39 444 0.5818 0.7299
AF-A0A133CPC5-F1-model_v4 42 571 29 423 0.5817 0.7304
AF-K0F8J3-F1-model_v4 47 571 29 434 0.5815 0.7235
AF-Q8DNH8-F1-model_v4 46 573 31 419 0.5766 0.7305
AF-Q7AQ51-F1-model_v4 48 574 34 445 0.5732 0.7112
AF-K0F002-F1-model_v4 19 570 30 439 0.5718 0.7075
AF-A0A0H3GKX2-F1-model_v4 48 570 30 396 0.5666 0.7341
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 30 584 30 506 0.6764 0.7826
A0A9Q8PNJ5 GH4 1 571 261 866 0.4352 0.537
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 30 584 30 506 0.6764 0.7826
K8EJG7 CBM50 , CE4 44 573 32 416 0.5626 0.7165
A0A9Q8PNJ5 GH4 1 571 261 866 0.4352 0.537
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5xs8-assembly1.cif.gz_A 48 579 1 474 0.7043 0.7951
5g62-assembly2.cif.gz_B 47 586 1 491 0.702 0.7811
5h6u-assembly1.cif.gz_A 42 584 2 487 0.6971 0.78
3vlw-assembly2.cif.gz_B 42 583 4 489 0.6956 0.7798
4tqu-assembly1.cif.gz_Q 42 584 5 491 0.693 0.7779
6jhx-assembly2.cif.gz_B 43 581 5 483 0.6922 0.7812
6fth-assembly1.cif.gz_A 44 584 1 496 0.6846 0.7591
3omb-assembly1.cif.gz_A 39 580 1 503 0.6797 0.7495
5suo-assembly1.cif.gz_A 46 584 1 451 0.6699 0.7716
5g5y-assembly1.cif.gz_A 44 586 1 494 0.6597 0.7354
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 36 586 33 538 0.6609 0.7482
AF-P37966-F1-model_v4 37 580 28 502 0.6505 0.7533
AF-A0A0H2UMY0-F1-model_v4 2 584 13 491 0.6149 0.701
AF-Q795R2-F1-model_v4 34 581 28 498 0.5951 0.6942
AF-Q8FVS7-F1-model_v4 45 571 22 411 0.5943 0.7443
AF-Q578M8-F1-model_v4 45 571 22 411 0.5939 0.7438
AF-Q92KZ7-F1-model_v4 44 570 18 414 0.5924 0.7337
AF-Q2YKZ9-F1-model_v4 46 571 23 411 0.5922 0.7432
AF-Q7LYW7-F1-model_v4 42 574 38 450 0.5902 0.7343
AF-O06875-F1-model_v4 44 570 25 421 0.589 0.7352
Download Full SwissProt Results