PROTEIN: HRGMv2_4229_11_8
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Protein File & Metadata
Source:
HRGMv2_4229_11_8.pdb
Genome ID:
Protein ID:
HRGMv2_4229_11_8
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Protein Sequence
MLFLIAIAGL LLRLSFINKP EGLWNDEYVS WYVANTPFHE GFWQEVLKQC HMPLYYLYLK 60 PFAHCSDLIL RLTSVVPNVL AIFVMYFVGK VYSKKLGIIC ATLTSFLSFL IYYSQEVRFY 120 SLLFLFSALA LLATIKLVKN TNRKNVVFYC FSMLLILLTH VLGGIFVLFN TLYVIYKKQC 180 FSKKILLPVF VGLIVVLPFG LNIIRMLPTS QWWGHFSYTN ILFLFSDYLS PILTNNINAP 240 TVFFYNKSFA LWQFLPCLIS AVPFLLGIKK AKGLSVVALL TVIVMSILAI FGKIVFITKY 300 SIEILPIIIF LLALGFDKLK KVGNALLSLL VLVHLCAFFT PNYVTKTIRY EGNRIPAEII 360 KARNPENVIF TYYEPNRFER YVDLSKKKVY YISKINRLDY LSNPAEILQN IKTGETVSVV 420 FLDSVSFFDE DFINANRENA KIPEMFMTFS HIKNSLIAGL NKDFTDFNVD KIGSWTVVSC 480 KKK 483
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 1 | 483 | 23 | 508 | 0.7632 |
0.8017 |
| AF-Q9HUZ2-F1-model_v4 | 1 | 483 | 8 | 476 | 0.7175 |
0.7535 |
| AF-Q9CC27-F1-model_v4 | 1 | 482 | 31 | 527 | 0.7108 |
0.7616 |
| AF-A0A0K0DXE0-F1-model_v4 | 2 | 481 | 2 | 492 | 0.7089 |
0.7397 |
| AF-O06152-F1-model_v4 | 1 | 482 | 60 | 556 | 0.6993 |
0.7655 |
| AF-Q5AK24-F1-model_v4 | 1 | 481 | 5 | 482 | 0.6952 |
0.7215 |
| AF-A0A0R4IE52-F1-model_v4 | 1 | 483 | 7 | 494 | 0.6911 |
0.7213 |
| AF-G5EDN2-F1-model_v4 | 1 | 482 | 3 | 495 | 0.6902 |
0.7215 |
| AF-A0A0K0EAE5-F1-model_v4 | 1 | 483 | 3 | 492 | 0.6901 |
0.7174 |
| AF-Q9BV10-F1-model_v4 | 1 | 483 | 9 | 488 | 0.6883 |
0.7153 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A543NUS7 | GT83 | 1 | 482 | 2 | 475 | 0.7999 |
0.8252 |
| AF-A0A7D3ZKU3-F1-model_v4 | GT83 | 3 | 482 | 1 | 460 | 0.7953 |
0.8309 |
| A0A919H1R8 | GT83 | 1 | 483 | 6 | 483 | 0.7831 |
0.8133 |
| AF-E4NCG6-F1-model_v4 | GT83 | 1 | 482 | 1 | 470 | 0.7782 |
0.8064 |
| AF-A0A0X3BL36-F1-model_v4 | GT0 | 1 | 481 | 55 | 510 | 0.7765 |
0.8547 |
| AF-A0A345SWL1-F1-model_v4 | GT83 | 1 | 483 | 1 | 497 | 0.7751 |
0.8047 |
| AF-A0A6F8YMS7-F1-model_v4 | GT83 | 6 | 483 | 1 | 452 | 0.7695 |
0.8147 |
| AF-A0A6P1FL66-F1-model_v4 | GT83 | 1 | 483 | 4 | 465 | 0.7687 |
0.8086 |
| AF-A0A3T1AZA5-F1-model_v4 | GT83 | 1 | 483 | 21 | 485 | 0.7686 |
0.8162 |
| AF-A0A7I7PDW5-F1-model_v4 | GT83 | 1 | 483 | 5 | 473 | 0.7676 |
0.8008 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q1IJH5 | GT83 | 1 | 483 | 19 | 483 | 0.8126 |
0.8579 |
| A0A543NUS7 | GT83 | 1 | 482 | 2 | 475 | 0.7999 |
0.8252 |
| A0A7D3ZKU3 | GT83 | 3 | 482 | 1 | 460 | 0.7953 |
0.8309 |
| A0A919H1R8 | GT83 | 1 | 483 | 6 | 483 | 0.7831 |
0.8133 |
| M2YG03 | GT83 | 1 | 483 | 31 | 505 | 0.7797 |
0.8283 |
| A0A345SWL1 | GT83 | 1 | 483 | 1 | 497 | 0.7751 |
0.8047 |
| A0A6F8YMS7 | GT83 | 6 | 483 | 1 | 452 | 0.7695 |
0.8147 |
| A0A3T1AZA5 | GT83 | 1 | 483 | 21 | 485 | 0.7686 |
0.8162 |
| A0A0D5CKI4 | GT83 | 1 | 482 | 1 | 476 | 0.767 |
0.7913 |
| A0A9E8TTR2 | GT83 | 1 | 483 | 28 | 520 | 0.7647 |
0.8095 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ezm-assembly1.cif.gz_A | 1 | 483 | 6 | 531 | 0.6635 |
0.7165 |
| 5f15-assembly1.cif.gz_A | 1 | 483 | 5 | 535 | 0.6595 |
0.7145 |
| 6s7o-assembly1.cif.gz_A | 1 | 483 | 16 | 646 | 0.6224 |
0.7278 |
| 6ftg-assembly1.cif.gz_5 | 1 | 483 | 22 | 643 | 0.6156 |
0.7151 |
| 8b6l-assembly1.cif.gz_I | 1 | 483 | 13 | 676 | 0.6143 |
0.7303 |
| 7oci-assembly1.cif.gz_F | 1 | 483 | 15 | 617 | 0.6095 |
0.7055 |
| 8agc-assembly1.cif.gz_A | 1 | 483 | 15 | 675 | 0.6087 |
0.7286 |
| 6c26-assembly1.cif.gz_A | 1 | 483 | 16 | 626 | 0.6056 |
0.7042 |
| 6ezn-assembly1.cif.gz_F | 1 | 483 | 15 | 628 | 0.6034 |
0.7034 |
| 6s7t-assembly1.cif.gz_A | 1 | 483 | 10 | 664 | 0.5999 |
0.7217 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67601-F1-model_v4 | 1 | 482 | 3 | 416 | 0.7151 |
0.789 |
| AF-Q6CAB8-F1-model_v4 | 1 | 481 | 13 | 510 | 0.6991 |
0.7395 |
| AF-Q5AK24-F1-model_v4 | 1 | 481 | 5 | 482 | 0.6952 |
0.7215 |
| AF-B4EUL1-F1-model_v4 | 1 | 482 | 10 | 548 | 0.6912 |
0.7515 |
| AF-Q9BV10-F1-model_v4 | 1 | 483 | 9 | 488 | 0.6883 |
0.7153 |
| AF-Q23361-F1-model_v4 | 2 | 483 | 1 | 491 | 0.6882 |
0.7155 |
| AF-Q9USN0-F1-model_v4 | 1 | 481 | 1 | 506 | 0.6861 |
0.7243 |
| AF-Q4ZSZ0-F1-model_v4 | 1 | 483 | 7 | 549 | 0.6849 |
0.7451 |
| AF-Q7SXZ1-F1-model_v4 | 1 | 483 | 37 | 527 | 0.6848 |
0.7366 |
| AF-Q1MLH5-F1-model_v4 | 1 | 482 | 5 | 466 | 0.6844 |
0.7271 |