PROTEIN: HRGMv2_4216_4_34
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Protein File & Metadata
Source:
HRGMv2_4216_4_34.pdb
Genome ID:
Protein ID:
HRGMv2_4216_4_34
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Protein Sequence
MKKTFMLASL IAMTAVASGT TGKVYLGTGT ESKFEKTIQE HKISESKIGT EVKVKDTGFS 60 FEGEFKLKDV KGFIAAPSYA LATKDSNVWA KYELPEIKGI NSSIKATYKE TTKLNLEGDV 120 NYTINGVKVG LNSNTTLSLK LEENKKLGEE TVSEHKLYVE AKEASVLKDV KANIKLVHTY 180 NTIEKNAKAI KNVSGEAEVT YDKVKDLKLT GKVNFKRNIN SDLKDEYKML NYKLYAEAPI 240 RYMHSYELNA EYTGIKHLTI MAKPFVAHFN GYKISEDEKK NVIVYGSEFG AEYKMLNDKL 300 TLTGKTLLAG RTSDVKFVSK IDDVKDRIKL TQGIFVFDAN VKYKYDVTNK FKVSPEANAY 360 VSLVTYMQGK KRIVTPNLTL TPKVNAEYKP IENLTLKGGV ELPIEFGNVN SKFDYKSTTI 420 KTSLNVEYKW 430
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I202-F1-model_v4 | 18 | 430 | 29 | 408 | 0.5767 |
0.6486 |
| AF-Q9HZH0-F1-model_v4 | 6 | 430 | 6 | 420 | 0.5682 |
0.5982 |
| AF-Q9HWP4-F1-model_v4 | 18 | 430 | 31 | 417 | 0.5672 |
0.6338 |
| AF-Q9I083-F1-model_v4 | 19 | 430 | 33 | 424 | 0.5614 |
0.626 |
| AF-A0A0H3GV90-F1-model_v4 | 19 | 430 | 32 | 421 | 0.5606 |
0.6257 |
| AF-Q9I6X0-F1-model_v4 | 18 | 430 | 33 | 443 | 0.5545 |
0.6041 |
| AF-Q9I0X7-F1-model_v4 | 19 | 430 | 40 | 447 | 0.5499 |
0.6057 |
| AF-Q9I161-F1-model_v4 | 18 | 430 | 55 | 471 | 0.5429 |
0.6032 |
| AF-P43839-F1-model_v4 | 21 | 430 | 34 | 359 | 0.535 |
0.6514 |
| AF-Q9I0E2-F1-model_v4 | 10 | 394 | 71 | 435 | 0.51 |
0.6131 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2y0k-assembly1.cif.gz_A | 19 | 430 | 9 | 363 | 0.6005 |
0.6804 |
| 3t20-assembly1.cif.gz_A | 20 | 430 | 7 | 361 | 0.5961 |
0.6739 |
| 3szv-assembly1.cif.gz_A | 18 | 430 | 13 | 363 | 0.5945 |
0.6804 |
| 3jty-assembly4.cif.gz_D | 19 | 430 | 5 | 384 | 0.5908 |
0.6457 |
| 4frx-assembly2.cif.gz_B | 19 | 430 | 7 | 399 | 0.5722 |
0.6185 |
| 4aui-assembly1.cif.gz_C | 21 | 430 | 5 | 308 | 0.5481 |
0.6597 |
| 6ehd-assembly1.cif.gz_A | 16 | 429 | 4 | 322 | 0.5266 |
0.6217 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P46027-F1-model_v4 | 22 | 429 | 33 | 371 | 0.5511 |
0.6561 |
| AF-P46026-F1-model_v4 | 22 | 429 | 33 | 386 | 0.5456 |
0.6364 |
| AF-Q48221-F1-model_v4 | 21 | 430 | 34 | 353 | 0.54 |
0.6624 |
| AF-Q48216-F1-model_v4 | 21 | 429 | 33 | 360 | 0.5393 |
0.6516 |
| AF-Q48217-F1-model_v4 | 21 | 430 | 34 | 361 | 0.5373 |
0.652 |
| AF-Q48219-F1-model_v4 | 22 | 429 | 34 | 367 | 0.5353 |
0.6418 |
| AF-P20149-F1-model_v4 | 21 | 430 | 34 | 361 | 0.531 |
0.6451 |
| AF-Q48218-F1-model_v4 | 21 | 429 | 33 | 369 | 0.5281 |
0.6302 |
| AF-P0DSN2-F1-model_v4 | 4 | 420 | 99 | 686 | 0.5184 |
0.6655 |