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PROTEIN: HRGMv2_4216_13_28

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4216_13_28.pdb
Genome ID:
HRGMv2_4216
Protein ID:
HRGMv2_4216_13_28

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKILTSILI   AISVLACGKK   EAANEVKTEG   LKGSIVVQAE   EPWKPYYEAA   IARVKEKNPE 60
ADIQLKVIPS   FDHLKIIDKT   DATNKDAADV   FAIPLDRMEG   LASKDVLASF   DAKALAEKIG 120
GFGDYDNGLG   GQLKVDGSYV   GLPFNIETLV   LGVNKKNAQD   NGVDIAKGID   FASLNPNVAM 180
IPVFNAWWGV   AITNAFDVEL   LRKDGDKFFS   DLTKNWEELT   PDQQKMFEGL   FNYWQASHKA 240
KLPMFDTQAV   YGYMDSAFAT   GKTGSARIIG   PWEVENIVGS   INDDFDVMGL   DKAMWQGKPL 300
KHWKGGWALV   INARNEEDKD   KMALSEAVMA   EIMNPKYAAD   LYNAAGKIMP   NVTKEQYEAM 360
ENIKPLDKKV   IASVIDSFAS   SVSRPLFKEW   GQVWDTWQNS   LLSWEAKKPA   NAQDAYKEVQ 420
ASFKALLTNL   GQ 432
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CKQ7-F1-model_v4 31 432 38 417 0.7628 0.8648
AF-A0A0H3GKJ8-F1-model_v4 23 432 18 404 0.7563 0.8383
AF-P76042-F1-model_v4 26 432 22 429 0.7488 0.8099
AF-K0F002-F1-model_v4 1 432 37 439 0.7483 0.8238
AF-A0A133CPC5-F1-model_v4 27 432 30 423 0.7445 0.8226
AF-P59214-F1-model_v4 29 432 37 423 0.738 0.829
AF-A0A132ZDH4-F1-model_v4 29 429 28 427 0.7377 0.8073
AF-Q2G1E9-F1-model_v4 1 432 31 418 0.7341 0.8235
AF-K0EWS9-F1-model_v4 2 432 39 463 0.729 0.7849
AF-A0A133CDW9-F1-model_v4 30 432 42 442 0.7196 0.8019
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K8EJG7-F1-model_v4 CBM50 , CE4 31 432 34 413 0.7455 0.8455
A0A0M1Q963 GH43_11 8 432 39 491 0.6515 0.7311
AF-K8E205-F1-model_v4 GH32 32 409 35 344 0.6452 0.806
A0A9Q8PNJ5 GH4 30 432 469 865 0.5704 0.8273
AF-A0A7U1BNH7-F1-model_v4 GH10 30 432 28 734 0.5544 0.7534
AF-A0A1Q2TKJ3-F1-model_v4 GH49 32 432 386 796 0.5413 0.7562
AF-A0A1B0VLS2-F1-model_v4 CBM0 29 432 543 947 0.5161 0.7639
A0A242CSU4 CBM35 31 432 575 967 0.5138 0.7862
UJP10085.1 GH154 1 408 428 1167 0.4093 0.6649
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
K8EJG7 CBM50 , CE4 31 432 34 413 0.7455 0.8455
A0A0M1Q963 GH43_11 8 432 39 491 0.6515 0.7311
K8E205 GH32 32 409 35 344 0.6452 0.806
A0A9Q8PNJ5 GH4 30 432 469 865 0.5704 0.8273
A0A7U1BNH7 GH10 30 432 28 734 0.5544 0.7534
A0A1Q2TKJ3 GH49 32 432 386 796 0.5413 0.7562
A0A242CSU4 CBM35 31 432 575 967 0.5138 0.7862
UJP10085.1 GH154 1 408 428 1167 0.4093 0.6649
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5tu0-assembly1.cif.gz_A 30 432 1 381 0.7872 0.8564
5mkb-assembly1.cif.gz_A 30 431 1 373 0.7807 0.8546
1mpc-assembly1.cif.gz_A 32 428 4 370 0.7697 0.851
2v93-assembly1.cif.gz_A 33 428 1 366 0.7687 0.848
1n3x-assembly1.cif.gz_A 32 430 4 366 0.7685 0.8542
4uac-assembly1.cif.gz_A 32 431 2 383 0.7649 0.8313
1peb-assembly1.cif.gz_A 32 430 4 366 0.7611 0.847
5aq9-assembly3.cif.gz_B 31 430 1 369 0.76 0.8386
7xmn-assembly1.cif.gz_A-2 33 430 1 367 0.7594 0.8379
2xd3-assembly1.cif.gz_A 34 431 1 375 0.7593 0.831
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O06989-F1-model_v4 31 432 34 416 0.7624 0.8564
AF-P76042-F1-model_v4 26 432 22 429 0.7488 0.8099
AF-O07009-F1-model_v4 28 432 31 416 0.7477 0.84
AF-O31518-F1-model_v4 20 431 21 427 0.7428 0.8048
AF-Q8FVS7-F1-model_v4 30 432 23 411 0.7405 0.8192
AF-Q578M8-F1-model_v4 30 432 23 411 0.7398 0.8184
AF-P59214-F1-model_v4 29 432 37 423 0.738 0.829
AF-Q2YKZ9-F1-model_v4 30 432 23 411 0.7372 0.8158
AF-P59213-F1-model_v4 29 432 37 423 0.7316 0.8222
AF-Q9K491-F1-model_v4 8 431 28 422 0.7315 0.8099
Download Full SwissProt Results