PROTEIN: HRGMv2_4200_22_17
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Protein File & Metadata
Source:
HRGMv2_4200_22_17.pdb
Genome ID:
Protein ID:
HRGMv2_4200_22_17
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Protein Sequence
MKKTKYRTFD EVYENYEGRN NILIALSIKK GSNILYLGNN KAHIRFLSNL GNLCICNGID 60 QLTSITESFD TLIADRFFDS IVWNQKIDFL LKLLTLKKES GHIYIFANNK LAIRYFSGTR 120 EEESSLPYGN LVVSNHLLSF REWERLIKST GEEFKFYFPY PDLDFTNTIY TNDPKLGQIQ 180 SVETLFKDYR LMMFNDVQAL NEINKSGYFK DFSNCFLIEI GSPSNVEMIK FSLERKPEFQ 240 MMTSILKNGT ERSVEKKCIC NAGIKHLDKI EEYYHRFNKY NQNLNIAYCP LKRKSQDTLE 300 FKYITGENLE EKIELAVMKR DRSKIESYLK IIDELASVGE RSPFKPNQRF YDVFGKRNYS 360 LLENQECYDI ANIDLIFGNV ICNNKYYAID YEWVFDCTIP KSYILFRTLL HSYALSKLEP 420 SDLEALYELC GINEQLKDIF MEMEYSFQDY VSHLKISDIQ KEYHLLKLFP YDLEQRIRKI 480 ELIQGEDKHT YYFDNGPSFN ETFDIVPGID VKLLIHGKSI LGIHQLTVDG KAVSFTTNAD 540 LIDGNNYYFL NDPEICICAP AGNQLDINGY FYLFNDGNID RIVELMNLIG ELAGQNHALQ 600 KHLDSLLSHK IVRLLDRKKK 620
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P9E9V2 | GT2 , GT4 | 1 | 604 | 34 | 1267 | 0.5196 |
0.8011 |
| A0A829WPC6 | GT2 , GT4 | 1 | 525 | 23 | 536 | 0.5001 |
0.8115 |
| A0A2T4T973 | GT2 , GT4 | 1 | 568 | 20 | 946 | 0.4944 |
0.7204 |
| AF-W5VX79-F1-model_v4 | GT2 | 2 | 605 | 44 | 1049 | 0.492 |
0.6688 |
| C6LFR9 | GT2 , GT4 | 1 | 619 | 34 | 960 | 0.4906 |
0.7408 |
| AUS78749.1 | GT2 | 3 | 604 | 17 | 1177 | 0.4867 |
0.6681 |
| AF-A0A1W6YSP4-F1-model_v4 | GT4 | 1 | 620 | 51 | 1125 | 0.4793 |
0.6206 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 2 | 605 | 16 | 494 | 0.4765 |
0.8072 |
| AF-A0A1H0A2W5-F1-model_v4 | GT2 | 2 | 568 | 34 | 1185 | 0.4761 |
0.6838 |
| AF-Q2Y6D3-F1-model_v4 | GT4 | 6 | 575 | 34 | 742 | 0.4729 |
0.6302 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P9E9V2 | GT2 , GT4 | 1 | 604 | 34 | 1267 | 0.5196 |
0.8011 |
| A0A829WPC6 | GT2 , GT4 | 1 | 525 | 23 | 536 | 0.5001 |
0.8115 |
| A0A2T4T973 | GT2 , GT4 | 1 | 568 | 20 | 946 | 0.4944 |
0.7204 |
| W5VX79 | GT2 | 2 | 605 | 44 | 1049 | 0.492 |
0.6688 |
| C6LFR9 | GT2 , GT4 | 1 | 619 | 34 | 960 | 0.4906 |
0.7408 |
| AUS78749.1 | GT2 | 3 | 604 | 17 | 1177 | 0.4867 |
0.6681 |
| A0A1W6YSP4 | GT4 | 1 | 620 | 51 | 1125 | 0.4793 |
0.6206 |
| Q2Y6D3 | GT4 | 6 | 575 | 34 | 742 | 0.4729 |
0.6302 |
| Q82X16 | GT4 | 1 | 592 | 54 | 845 | 0.4688 |
0.6208 |
| A0A4D7YL43 | GT2 | 2 | 593 | 77 | 1235 | 0.4672 |
0.6594 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.