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PROTEIN: HRGMv2_4200_13_34

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Protein File & Metadata
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Source:
HRGMv2_4200_13_34.pdb
Genome ID:
HRGMv2_4200
Protein ID:
HRGMv2_4200_13_34

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Detailed structural information will appear here after analysis...

Protein Sequence 
MDFIPATGTN   VNPAIYETLE   GQRRALHGYP   FMEDACFEAF   KNQKNYGTYV   IPGLIRTETV 60
NQYGEAEECP   DMTPQGITAA   DDYILISAYC   SEHKHNSVIY   VLNKRSHLFV   KVIVLPNRSH 120
CGGLAYDPVC   RNVWVATKNA   EKGHGSISAL   KLSSLDAYNF   TKARRPLSFD   YVRELPQMKN 180
NTFITYYGFE   VYCGTYDQKK   RQLNLYIYGV   NPWTGWLDKN   KMRSIHAKDF   DFIGQYCQGI 240
AISKEYILIS   ASDGPRQEST   ISFFRQDKNY   FASGKPERTI   YLPPRLEQIY   FDGSNTLLLL 300
FESAAKVYRN   QETEDIDRVL   KCDVSLLRNS   SRS 333
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A077ZFB1-F1-model_v4 72 330 1 255 0.8033 0.9245
AF-K0EMT2-F1-model_v4 21 333 54 336 0.7115 0.8504
AF-K0ESM3-F1-model_v4 31 331 33 259 0.6314 0.8183
AF-A0A175VTV5-F1-model_v4 2 333 70 382 0.6219 0.7182
AF-Q09278-F1-model_v4 26 333 11 301 0.5888 0.6733
AF-Q0PAF1-F1-model_v4 31 330 22 440 0.5882 0.7499
AF-O02195-F1-model_v4 19 331 3 323 0.5358 0.5855
AF-Q38884-F1-model_v4 19 331 3 326 0.5342 0.5864
AF-A0A1C1CFX2-F1-model_v4 19 330 3 326 0.5254 0.5835
AF-C1HC57-F1-model_v4 19 331 3 329 0.5245 0.5841
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A2S1YQM3-F1-model_v4 GH130 19 333 6 319 0.6258 0.6755
AF-A0A3T1AZH8-F1-model_v4 CBM13 , GH43_24 41 332 23 311 0.5232 0.7048
AF-A0A6G9Q7L5-F1-model_v4 CBM50 31 326 53 303 0.4574 0.7922
A0A7Z7BZ56 CBM13 20 329 754 1088 0.3915 0.6434
AF-A0A7Z7BZ56-F1-model_v4 CBM13 20 329 754 1088 0.3915 0.6434
AF-K9VCC8-F1-model_v4 GH18 15 327 489 802 0.368 0.621
AF-A0A1Z4HAA5-F1-model_v4 CBM13 , GH18 34 332 495 748 0.363 0.733
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A895YLP2 GH130 29 333 15 324 0.6198 0.6949
W0IVB3 GH130 28 333 35 349 0.5958 0.6884
A0A650A6B0 GH32 1 333 4 452 0.5416 0.6581
WBP91217.1 GH23 2 333 52 411 0.5249 0.6071
L0A538 CBM32 15 332 41 460 0.4924 0.6258
A0A6G9Q7L5 CBM50 31 326 53 303 0.4574 0.7922
B8GG43 CBM6 13 333 40 390 0.4407 0.6009
A0A7Z7BZ56 CBM13 20 329 754 1088 0.3915 0.6434
K9VCC8 GH18 15 327 489 802 0.368 0.621
A0A0H4PDM2 CBM57 27 333 953 1408 0.3549 0.6301
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2faw-assembly2.cif.gz_B 31 333 4 238 0.644 0.7955
6xn0-assembly2.cif.gz_B 15 333 4 321 0.6203 0.6695
7on7-assembly2.cif.gz_B 9 332 7 256 0.6119 0.747
3fw0-assembly1.cif.gz_A 30 333 11 329 0.5567 0.623
6n31-assembly1.cif.gz_A 22 326 3 308 0.5366 0.5885
4cy3-assembly1.cif.gz_A 13 328 12 303 0.5116 0.5788
6y7e-assembly1.cif.gz_A 31 332 3 418 0.4632 0.6441
6y77-assembly1.cif.gz_B 33 332 4 421 0.4599 0.6463
7ux2-assembly1.cif.gz_A 2 330 16 1103 0.3423 0.535
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q09278-F1-model_v4 26 333 11 301 0.5888 0.6733
AF-B4N0L0-F1-model_v4 12 331 3 319 0.5391 0.5798
AF-B4KGX9-F1-model_v4 12 331 3 319 0.5379 0.5787
AF-B4NW98-F1-model_v4 19 331 1 319 0.537 0.5826
AF-P0CS32-F1-model_v4 19 329 3 329 0.5366 0.6011
AF-B4Q354-F1-model_v4 19 330 3 322 0.5365 0.587
AF-B4GSH1-F1-model_v4 19 331 3 323 0.5362 0.5862
AF-B0XFT7-F1-model_v4 19 331 3 325 0.5362 0.5871
AF-Q29L19-F1-model_v4 19 331 3 323 0.5361 0.5856
AF-B4LUA5-F1-model_v4 19 330 1 317 0.5359 0.583
Download Full SwissProt Results