PROTEIN: HRGMv2_4197_10_39
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Protein File & Metadata
Source:
HRGMv2_4197_10_39.pdb
Genome ID:
Protein ID:
HRGMv2_4197_10_39
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Protein Sequence
MSLHTDILNQ ISKDIVTAIN YKQPVIDTDD AMTGVMEFLS SAVPSIAITG NESIDALIDD 60 YLAKLFMQVR VLSSKAFLHN PYIQNIHFHD QTHGHYQLRN MTYEKGELFF YDFPYQTDGI 120 LIPRIGCFDK RVSFPSIYEG SMPWMSVIPS EIKTMSLPIQ KACGNVLTLG LGLGYYPYMA 180 ALKDDVRSMT VVEKSADVID LFKYCILNQF SREVKDKFQI IHEDAFQYMD SVTDGMYDVI 240 FTDIYEGYED GHQVYESMQK YQKTLVNTDI EYWIESYIH 279
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q59Z50-F1-model_v4 | 13 | 279 | 20 | 216 | 0.4725 |
0.6841 |
| AF-Q38EH6-F1-model_v4 | 16 | 279 | 19 | 215 | 0.4717 |
0.6834 |
| AF-P19623-F1-model_v4 | 15 | 279 | 28 | 220 | 0.466 |
0.6899 |
| AF-Q64674-F1-model_v4 | 16 | 279 | 28 | 220 | 0.4639 |
0.687 |
| AF-B4FR86-F1-model_v4 | 16 | 279 | 52 | 246 | 0.4482 |
0.6849 |
| AF-Q9ZUB3-F1-model_v4 | 16 | 279 | 55 | 248 | 0.4476 |
0.6877 |
| AF-C6TD35-F1-model_v4 | 16 | 279 | 61 | 255 | 0.4471 |
0.6873 |
| AF-I1KCI0-F1-model_v4 | 16 | 279 | 50 | 243 | 0.4464 |
0.6895 |
| AF-K7V5C5-F1-model_v4 | 6 | 279 | 31 | 270 | 0.4263 |
0.5758 |
| AF-A0A1D6GYS6-F1-model_v4 | 16 | 279 | 76 | 269 | 0.418 |
0.6878 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6o64-assembly4.cif.gz_H | 16 | 279 | 16 | 239 | 0.4839 |
0.611 |
| 4yuv-assembly1.cif.gz_A | 16 | 279 | 11 | 206 | 0.4794 |
0.6846 |
| 8iyi-assembly1.cif.gz_A | 13 | 279 | 19 | 213 | 0.4741 |
0.6854 |
| 8iyi-assembly1.cif.gz_B | 13 | 279 | 16 | 212 | 0.4724 |
0.6746 |
| 5y4p-assembly1.cif.gz_A | 13 | 279 | 7 | 193 | 0.4664 |
0.6732 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A2BZ72-F1-model_v4 | 16 | 279 | 12 | 206 | 0.483 |
0.6919 |
| AF-Q814Q1-F1-model_v4 | 16 | 279 | 10 | 203 | 0.4824 |
0.6853 |
| AF-Q2RHH3-F1-model_v4 | 13 | 279 | 11 | 203 | 0.482 |
0.6954 |
| AF-Q7UZI0-F1-model_v4 | 16 | 279 | 13 | 206 | 0.4819 |
0.6934 |
| AF-A3PFH4-F1-model_v4 | 16 | 279 | 12 | 206 | 0.4809 |
0.6889 |
| AF-A2BTR7-F1-model_v4 | 16 | 279 | 12 | 206 | 0.4808 |
0.6887 |
| AF-A2C5F4-F1-model_v4 | 16 | 279 | 16 | 210 | 0.4807 |
0.6939 |
| AF-Q46IA2-F1-model_v4 | 15 | 279 | 16 | 210 | 0.4786 |
0.6909 |
| AF-B0SI93-F1-model_v4 | 13 | 279 | 10 | 204 | 0.4786 |
0.6833 |
| AF-Q7V9I5-F1-model_v4 | 16 | 279 | 17 | 210 | 0.4762 |
0.6897 |