PROTEIN: HRGMv2_4192_7_12
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Protein File & Metadata
Source:
HRGMv2_4192_7_12.pdb
Genome ID:
Protein ID:
HRGMv2_4192_7_12
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Protein Sequence
MENNLKKNVI WNTLGLTFNS FNSLFFLIII NRINGIDDGG IFSFAFSLAC LLFVVGIYAG 60 RTYQISDVKG ELNDTEYLVH KIITCVLMML ICFGYIFIKN YSIEKNIIII TLTLYKCLEA 120 FSDTLYGYMQ KQNYLYLCGM SQFIKSIISI IIFLLIDLAT KSLIFSCYGL IIVNLLVIIL 180 FDFPAVKKIT QRQEVKLKRV FNLFKAGFTI FAFSFLAIYI VNVPKYTIDG MMDNSFQTIF 240 NIIVMPATVI SLCGQYIMGP ILTELVEAYN SNNYLKFKSL VYKIVKLIIL FGIIIEAGAY 300 LLGIPVLSLI YAIDLSAYKY DLLIIIFGAI LYALANVFST GLITMRKNNL QLVIYISSAI 360 VGWVLSNLSI MKFGIHGATY AYFGTMLWHG LLYTIYFKYE YKKLIN 406
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37746-F1-model_v4 | 1 | 406 | 3 | 415 | 0.8685 |
0.896 |
| AF-P71399-F1-model_v4 | 2 | 404 | 1 | 401 | 0.862 |
0.8859 |
| AF-P26400-F1-model_v4 | 1 | 405 | 7 | 430 | 0.8456 |
0.8908 |
| AF-Q2G1J8-F1-model_v4 | 1 | 406 | 1 | 398 | 0.8448 |
0.8772 |
| AF-Q32EG2-F1-model_v4 | 6 | 398 | 3 | 396 | 0.8363 |
0.8728 |
| AF-Q2G262-F1-model_v4 | 1 | 403 | 2 | 406 | 0.8288 |
0.9123 |
| AF-P0AAA7-F1-model_v4 | 2 | 406 | 1 | 416 | 0.8263 |
0.8604 |
| AF-Q58770-F1-model_v4 | 1 | 405 | 1 | 415 | 0.8262 |
0.8583 |
| AF-G3XD19-F1-model_v4 | 1 | 406 | 1 | 411 | 0.8246 |
0.854 |
| AF-Q57484-F1-model_v4 | 1 | 406 | 1 | 402 | 0.8232 |
0.8523 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 404 | 3 | 437 | 0.7938 |
0.9032 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 404 | 38 | 468 | 0.7542 |
0.8796 |
| QNU38870.1 | GT4 | 2 | 404 | 1 | 409 | 0.7271 |
0.8843 |
| B1FZW0 | GT2 | 1 | 406 | 1 | 429 | 0.701 |
0.901 |
| AF-A0A248VQW5-F1-model_v4 | GT2 | 1 | 406 | 1 | 429 | 0.7005 |
0.9004 |
| AF-A0A345VG16-F1-model_v4 | GT2 | 1 | 406 | 269 | 681 | 0.6872 |
0.875 |
| AF-A0A5B8KBR4-F1-model_v4 | GT2 | 1 | 406 | 269 | 682 | 0.682 |
0.8707 |
| AF-A0A1P8M2V1-F1-model_v4 | GT2 | 1 | 406 | 274 | 687 | 0.6815 |
0.8722 |
| A0A836MCF6 | GT100 | 2 | 406 | 1 | 403 | 0.6726 |
0.8689 |
| A0A0J6W0G8 | GH16_3 | 1 | 406 | 17 | 427 | 0.6673 |
0.8542 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 404 | 3 | 437 | 0.7938 |
0.9032 |
| A0A160T2N7 | GT28 | 1 | 404 | 38 | 468 | 0.7542 |
0.8796 |
| QNU38870.1 | GT4 | 2 | 404 | 1 | 409 | 0.7271 |
0.8843 |
| B1FZW0 | GT2 | 1 | 406 | 1 | 429 | 0.701 |
0.901 |
| A0A836MCF6 | GT100 | 2 | 406 | 1 | 403 | 0.6726 |
0.8689 |
| A0A0J6W0G8 | GH16_3 | 1 | 406 | 17 | 427 | 0.6673 |
0.8542 |
| A0A2U8PPB3 | GT4 | 2 | 403 | 1 | 405 | 0.6652 |
0.9088 |
| QJC17489.1 | GT2 | 1 | 405 | 338 | 772 | 0.6585 |
0.8981 |
| A0A543Z557 | GH16_5 | 1 | 405 | 5 | 437 | 0.6576 |
0.8579 |
| A0A7G6YY69 | GT4 | 1 | 406 | 29 | 436 | 0.6573 |
0.8841 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6fhz-assembly1.cif.gz_A | 9 | 406 | 10 | 437 | 0.826 |
0.8917 |
| 7waw-assembly1.cif.gz_A | 10 | 405 | 1 | 429 | 0.7595 |
0.8699 |
| 6nc6-assembly2.cif.gz_B | 6 | 399 | 1 | 405 | 0.7583 |
0.8461 |
| 7wag-assembly1.cif.gz_A | 5 | 405 | 4 | 437 | 0.7368 |
0.8529 |
| 5y50-assembly1.cif.gz_A | 5 | 404 | 10 | 438 | 0.7219 |
0.7914 |
| 6gwh-assembly1.cif.gz_A | 1 | 406 | 2 | 438 | 0.7093 |
0.7653 |
| 4mlb-assembly1.cif.gz_C | 1 | 406 | 4 | 451 | 0.7071 |
0.7712 |
| 6hfb-assembly3.cif.gz_C | 1 | 406 | 4 | 450 | 0.7052 |
0.7686 |
| 5xjj-assembly1.cif.gz_A | 5 | 405 | 11 | 437 | 0.7049 |
0.7735 |
| 3wbn-assembly1.cif.gz_A | 1 | 406 | 1 | 449 | 0.7013 |
0.7642 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39855-F1-model_v4 | 2 | 402 | 1 | 396 | 0.9114 |
0.9361 |
| AF-P37746-F1-model_v4 | 1 | 406 | 3 | 415 | 0.8685 |
0.896 |
| AF-P71399-F1-model_v4 | 2 | 404 | 1 | 401 | 0.862 |
0.8859 |
| AF-Q45411-F1-model_v4 | 1 | 406 | 8 | 430 | 0.8571 |
0.9042 |
| AF-Q99191-F1-model_v4 | 1 | 405 | 8 | 432 | 0.8538 |
0.9 |
| AF-Q05347-F1-model_v4 | 1 | 406 | 2 | 431 | 0.8524 |
0.901 |
| AF-P37781-F1-model_v4 | 2 | 406 | 1 | 418 | 0.8475 |
0.8816 |
| AF-P26400-F1-model_v4 | 1 | 405 | 7 | 430 | 0.8456 |
0.8908 |
| AF-Q9CNC5-F1-model_v4 | 2 | 406 | 1 | 399 | 0.8343 |
0.8633 |
| AF-Q03583-F1-model_v4 | 6 | 399 | 3 | 396 | 0.834 |
0.8686 |